Caretta caretta (Loggerhead turtle): 125640811
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Entry
125640811 CDS
T09292
Symbol
PDGFRB
Name
(RefSeq) platelet-derived growth factor receptor beta
KO
K05089
platelet-derived growth factor receptor beta [EC:
2.7.10.1
]
Organism
ccay
Caretta caretta (Loggerhead turtle)
Pathway
ccay04010
MAPK signaling pathway
ccay04020
Calcium signaling pathway
ccay04510
Focal adhesion
ccay04518
Integrin signaling
ccay04519
Cadherin signaling
ccay04540
Gap junction
ccay04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
125640811 (PDGFRB)
04020 Calcium signaling pathway
125640811 (PDGFRB)
09133 Signaling molecules and interaction
04518 Integrin signaling
125640811 (PDGFRB)
04519 Cadherin signaling
125640811 (PDGFRB)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
125640811 (PDGFRB)
04540 Gap junction
125640811 (PDGFRB)
09142 Cell motility
04810 Regulation of actin cytoskeleton
125640811 (PDGFRB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
ccay01001
]
125640811 (PDGFRB)
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
ccay04090
]
125640811 (PDGFRB)
Enzymes [BR:
ccay01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
125640811 (PDGFRB)
Protein kinases [BR:
ccay01001
]
Receptor tyrosine kinases (RTK)
PDGFR family [OT]
125640811 (PDGFRB)
CD molecules [BR:
ccay04090
]
Proteins
125640811 (PDGFRB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Ig_PDGFR_d4
Pkinase
Ig_3
I-set
VEGFR1-3_N_Ig-like
ig
Ig_2
Ig_VEGFR-1-like_5th
V-set
VEGFR-1-like_Ig-like
C1-set
Motif
Other DBs
NCBI-GeneID:
125640811
NCBI-ProteinID:
XP_048715710
LinkDB
All DBs
Position
8
Genome browser
AA seq
1101 aa
AA seq
DB search
MRPAVQLNPTMLLPALKMFLLFLAGLPAAVSGSSKLHISPSNPEVILSLLSNFSLTCSGE
AEVVWERDTQPIAASPEWRDGTFSSTFTLWNVTGLDTGEYVCTYNQSQNQKHVERQAVYV
FVPDPSLVFLPTTSEESFIFMTGNSEATIPCRVTDPQARVTLYERKVENPIPAVYDRQQG
FKGFFEDKTYICRAMLDEREADSEAYYVYRIQVSSLNVSISAVQTVVKQGENITVMCTVS
GNEVVDFSWFYPRQEAGKAVEPVMAFLPGSSHDIRSTVTIQNAELEDAGTYICHVSEVYL
QNMDKKDIEVNVIERGFVRFHTGLNNIELAEVHKSRTIQVQIEAYPQPTILWLKDNETLW
VGNSSEFAITSKNLSETRYQTTLTLVRVKQKEGGFYTVRASHEDDTQELSFYLQINVPAN
VLSLKENSNASSGEQTVTCSTEGMPQPELRWFTCNNIKGCGTKEQPTRVLGNNSEEINLQ
TISTYHETLKVYRVNSTLRLRRVDEPLLIRCSVQNLLGSNFQDITLVSHALPFKMIIISV
ILALVVVLAVIFLVVLIVLWLKKPRYEIRWKVIESVSSDGHEYIYVDPMQLPYDCSWELS
RDKLVLGRTLGSGAFGRVVEATAHGLSHSQSTMRVAVKMLKSTARTSEKQALMSELKIMS
HLGPHLNIVNLLGACTKGGPIYIITECCRYGDLVDYLLRNKHTFLQYYTEKARREMEVYG
NASEEDKVYSLTSFSVESDGGYMDMSKDDFLDYVPMSDMKGEIKYADIESSNYGTPYELD
SYSPSAPERTDRVTLINESPLLSYTDLVGFSFQVANGMEFLASKNCVHRDLAARNVLICE
GKLVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFNNLYTTLSDVWSFGILLWEI
FTLGGTPYPELPMNEQFYNAIKCGYRMSKPTHASNEIYDIMQKCWEEKFEIRPSFSQLVV
LMGNLLADGYKKRYQQVEEEFLKSDHPAVLRTRPRIPGVSSAGLTPSSGTGSVLYTAVQQ
DGGDNDYIIPLPDPKPDGIDDAPQEASVSRASSTLNEVNTASTISCDSPLDLQQEGEQEP
EPKSGCQEPSPGHHDMEESFL
NT seq
3306 nt
NT seq
+upstream
nt +downstream
nt
atgcggcctgcagtgcagctgaaccccaccatgctccttccagctctgaagatgttcctc
ctcttcctcgcaggtttgccagctgcggtgtctggaagcagcaagctgcacatttcaccc
agcaaccccgaagtcatcctcagtctcttgagcaacttctcactgacatgctcgggggag
gccgaggtggtctgggaacgggacacgcagcccatagccgcgtcgccagagtggagagac
ggcaccttctccagcacgttcacactctggaacgtgacaggccttgacacgggggagtac
gtctgcacctacaaccaatcccagaaccagaagcacgtggagagacaggccgtctatgtc
tttgtgccagacccctccttggtcttcctccccacaacctccgaggaatcattcatcttc
atgaccggcaacagtgaggccaccatcccgtgccgcgtcactgacccccaagccagggtg
actctctatgagaggaaggtggagaacccaattcccgcagtctatgacaggcaacaaggc
ttcaaggggttcttcgaagacaagacctacatctgccgggcaatgctagatgagcgggag
gcggactctgaggcatattacgtctacagaatccaggtctcgtccctcaatgtttccatc
agtgcggtgcagaccgtggtgaagcaaggcgagaacatcactgtgatgtgcactgtaagc
ggcaacgaagtggtcgatttcagctggttttaccctcgccaggaggcaggtaaggccgtg
gagcctgtgatggccttcttgcctggatccagccatgacatccgctccaccgtgaccatc
cagaacgcagagctggaggacgccggcacctacatctgccacgtctccgaggtctacctc
cagaatatggacaagaaggacattgaggtcaacgtgatcgagcgtggctttgtgaggttc
cacactggtctgaacaacatcgagttggccgaggtgcacaagagtcgcaccatccaggtg
cagatcgaggcctatccgcagccaaccatcctgtggctgaaggacaatgagactctgtgg
gtggggaacagcagcgaattcgccatcaccagcaagaacctgtcggaaaccaggtaccaa
accactctgaccctggtgcgggtgaagcagaaagaagggggattctacaccgtccgggca
tcccatgaggatgacacgcaggagctgtccttctacctgcaaattaacgtgcccgccaat
gtgttgtcgctgaaggagaacagcaatgccagcagtggggagcagaccgtcacgtgctcc
actgaagggatgccccagccggagctcaggtggttcacctgcaacaacatcaaagggtgc
ggcaccaaggagcagcccaccagggtcctggggaacaactcagaggagatcaacctgcaa
accatctctacgtaccacgagacactgaaggtttacagagtgaacagcacactgcggctc
cgcagggtggacgaacccctgctcatcagatgctctgtgcagaacctcctgggcagtaac
tttcaggacatcaccctggtctcacacgctttgcccttcaagatgatcatcatctcagtc
attctggccttggtggtggtgcttgccgtcatcttcctggtggtcctcatcgtcctgtgg
ctgaagaagcctcgctatgaaatccgttggaaggtgattgagtcggtcagctccgatgga
catgagtacatctacgtggatccgatgcaactcccctacgactgcagctgggagctctcc
cgggacaagctagtgctaggtcgcactctcggatccggagcctttggccgagttgtggag
gcaacggcccatggcctgagccattcgcaatccacgatgcgagtggctgtgaaaatgctc
aaatctaccgccaggaccagcgagaaacaggccctgatgtctgagctgaagatcatgagc
cacctgggacctcacctaaacattgtcaacttgcttggagcctgcaccaaaggaggcccc
atctatatcataacggagtgttgccgctacggagacctcgtggactacctgctccggaac
aagcacaccttcctccagtactacactgagaaagcaaggcgagagatggaggtgtatggg
aatgcctccgaagaggacaaggtgtacagcctcacctccttctctgtcgaaagcgacggg
ggctacatggatatgagcaaggatgacttcctggactacgttcccatgtctgatatgaag
ggagagatcaagtatgctgacattgagtcctccaactacggcaccccctacgagctggac
agctattccccctcagctcccgaaaggacggatcgcgtgaccctgataaacgagtccccg
ctcctcagctacacagacctggttgggtttagtttccaggtggccaacgggatggagttc
ctcgcgtccaaaaactgtgtgcaccgagacctggcagcaaggaacgtcctcatctgcgag
gggaagctggtgaagatctgtgactttggcctggccagagatatcatgagagattccaac
tacatctccaaaggcagcaccttcctgcctttgaaatggatggcgcctgagagcatcttc
aacaacctctacacaaccctgagtgatgtgtggtcttttgggatcctcctctgggagata
ttcactctgggtgggactccataccctgaactacccatgaatgagcagttctacaatgcc
atcaaatgtggctatcgaatgtctaaacccacccatgcttccaacgagatctatgacatc
atgcagaaatgttgggaagagaagtttgagataagaccttccttctctcagctggtggta
cttatggggaacctcctggcagatggatacaagaagaggtaccaacaggtcgaggaggaa
ttcctgaagagcgaccaccctgctgttctgcgcacaaggcccagaatcccaggggtcagc
agcgccgggctcacccccagctctggcaccggaagtgtcctctatacagctgtgcagcag
gatgggggggacaatgattacatcatccccctccctgatcccaagcccgacggaatcgat
gacgcccctcaggaggcttctgtcagccgggccagttctactctgaacgaagtgaacaca
gcgtccacaatatcctgcgacagccccctggacctacagcaggaaggggaacaggaacct
gaaccaaagtcgggctgccaggagccaagcccagggcaccacgacatggaagaaagtttt
ctgtag
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integrated database retrieval system
