Caretta caretta (Loggerhead turtle): 125640811
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Entry
125640811 CDS
T09292
Symbol
PDGFRB
Name
(RefSeq) platelet-derived growth factor receptor beta
KO
K05089
platelet-derived growth factor receptor beta [EC:
2.7.10.1
]
Organism
ccay
Caretta caretta (Loggerhead turtle)
Pathway
ccay04010
MAPK signaling pathway
ccay04020
Calcium signaling pathway
ccay04510
Focal adhesion
ccay04540
Gap junction
ccay04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
125640811 (PDGFRB)
04020 Calcium signaling pathway
125640811 (PDGFRB)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
125640811 (PDGFRB)
04540 Gap junction
125640811 (PDGFRB)
09142 Cell motility
04810 Regulation of actin cytoskeleton
125640811 (PDGFRB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
ccay01001
]
125640811 (PDGFRB)
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
ccay04090
]
125640811 (PDGFRB)
Enzymes [BR:
ccay01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
125640811 (PDGFRB)
Protein kinases [BR:
ccay01001
]
Receptor tyrosine kinases (RTK)
PDGFR family [OT]
125640811 (PDGFRB)
CD molecules [BR:
ccay04090
]
Proteins
125640811 (PDGFRB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
Ig_3
I-set
ig
Ig_2
V-set
VEGFR1-3_N_Ig-like
VEGFR-1-like_Ig-like
C1-set
Motif
Other DBs
NCBI-GeneID:
125640811
NCBI-ProteinID:
XP_048715710
LinkDB
All DBs
Position
8:7155677..7218454
Genome browser
AA seq
1101 aa
AA seq
DB search
MRPAVQLNPTMLLPALKMFLLFLAGLPAAVSGSSKLHISPSNPEVILSLLSNFSLTCSGE
AEVVWERDTQPIAASPEWRDGTFSSTFTLWNVTGLDTGEYVCTYNQSQNQKHVERQAVYV
FVPDPSLVFLPTTSEESFIFMTGNSEATIPCRVTDPQARVTLYERKVENPIPAVYDRQQG
FKGFFEDKTYICRAMLDEREADSEAYYVYRIQVSSLNVSISAVQTVVKQGENITVMCTVS
GNEVVDFSWFYPRQEAGKAVEPVMAFLPGSSHDIRSTVTIQNAELEDAGTYICHVSEVYL
QNMDKKDIEVNVIERGFVRFHTGLNNIELAEVHKSRTIQVQIEAYPQPTILWLKDNETLW
VGNSSEFAITSKNLSETRYQTTLTLVRVKQKEGGFYTVRASHEDDTQELSFYLQINVPAN
VLSLKENSNASSGEQTVTCSTEGMPQPELRWFTCNNIKGCGTKEQPTRVLGNNSEEINLQ
TISTYHETLKVYRVNSTLRLRRVDEPLLIRCSVQNLLGSNFQDITLVSHALPFKMIIISV
ILALVVVLAVIFLVVLIVLWLKKPRYEIRWKVIESVSSDGHEYIYVDPMQLPYDCSWELS
RDKLVLGRTLGSGAFGRVVEATAHGLSHSQSTMRVAVKMLKSTARTSEKQALMSELKIMS
HLGPHLNIVNLLGACTKGGPIYIITECCRYGDLVDYLLRNKHTFLQYYTEKARREMEVYG
NASEEDKVYSLTSFSVESDGGYMDMSKDDFLDYVPMSDMKGEIKYADIESSNYGTPYELD
SYSPSAPERTDRVTLINESPLLSYTDLVGFSFQVANGMEFLASKNCVHRDLAARNVLICE
GKLVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFNNLYTTLSDVWSFGILLWEI
FTLGGTPYPELPMNEQFYNAIKCGYRMSKPTHASNEIYDIMQKCWEEKFEIRPSFSQLVV
LMGNLLADGYKKRYQQVEEEFLKSDHPAVLRTRPRIPGVSSAGLTPSSGTGSVLYTAVQQ
DGGDNDYIIPLPDPKPDGIDDAPQEASVSRASSTLNEVNTASTISCDSPLDLQQEGEQEP
EPKSGCQEPSPGHHDMEESFL
NT seq
3306 nt
NT seq
+upstream
nt +downstream
nt
atgcggcctgcagtgcagctgaaccccaccatgctccttccagctctgaagatgttcctc
ctcttcctcgcaggtttgccagctgcggtgtctggaagcagcaagctgcacatttcaccc
agcaaccccgaagtcatcctcagtctcttgagcaacttctcactgacatgctcgggggag
gccgaggtggtctgggaacgggacacgcagcccatagccgcgtcgccagagtggagagac
ggcaccttctccagcacgttcacactctggaacgtgacaggccttgacacgggggagtac
gtctgcacctacaaccaatcccagaaccagaagcacgtggagagacaggccgtctatgtc
tttgtgccagacccctccttggtcttcctccccacaacctccgaggaatcattcatcttc
atgaccggcaacagtgaggccaccatcccgtgccgcgtcactgacccccaagccagggtg
actctctatgagaggaaggtggagaacccaattcccgcagtctatgacaggcaacaaggc
ttcaaggggttcttcgaagacaagacctacatctgccgggcaatgctagatgagcgggag
gcggactctgaggcatattacgtctacagaatccaggtctcgtccctcaatgtttccatc
agtgcggtgcagaccgtggtgaagcaaggcgagaacatcactgtgatgtgcactgtaagc
ggcaacgaagtggtcgatttcagctggttttaccctcgccaggaggcaggtaaggccgtg
gagcctgtgatggccttcttgcctggatccagccatgacatccgctccaccgtgaccatc
cagaacgcagagctggaggacgccggcacctacatctgccacgtctccgaggtctacctc
cagaatatggacaagaaggacattgaggtcaacgtgatcgagcgtggctttgtgaggttc
cacactggtctgaacaacatcgagttggccgaggtgcacaagagtcgcaccatccaggtg
cagatcgaggcctatccgcagccaaccatcctgtggctgaaggacaatgagactctgtgg
gtggggaacagcagcgaattcgccatcaccagcaagaacctgtcggaaaccaggtaccaa
accactctgaccctggtgcgggtgaagcagaaagaagggggattctacaccgtccgggca
tcccatgaggatgacacgcaggagctgtccttctacctgcaaattaacgtgcccgccaat
gtgttgtcgctgaaggagaacagcaatgccagcagtggggagcagaccgtcacgtgctcc
actgaagggatgccccagccggagctcaggtggttcacctgcaacaacatcaaagggtgc
ggcaccaaggagcagcccaccagggtcctggggaacaactcagaggagatcaacctgcaa
accatctctacgtaccacgagacactgaaggtttacagagtgaacagcacactgcggctc
cgcagggtggacgaacccctgctcatcagatgctctgtgcagaacctcctgggcagtaac
tttcaggacatcaccctggtctcacacgctttgcccttcaagatgatcatcatctcagtc
attctggccttggtggtggtgcttgccgtcatcttcctggtggtcctcatcgtcctgtgg
ctgaagaagcctcgctatgaaatccgttggaaggtgattgagtcggtcagctccgatgga
catgagtacatctacgtggatccgatgcaactcccctacgactgcagctgggagctctcc
cgggacaagctagtgctaggtcgcactctcggatccggagcctttggccgagttgtggag
gcaacggcccatggcctgagccattcgcaatccacgatgcgagtggctgtgaaaatgctc
aaatctaccgccaggaccagcgagaaacaggccctgatgtctgagctgaagatcatgagc
cacctgggacctcacctaaacattgtcaacttgcttggagcctgcaccaaaggaggcccc
atctatatcataacggagtgttgccgctacggagacctcgtggactacctgctccggaac
aagcacaccttcctccagtactacactgagaaagcaaggcgagagatggaggtgtatggg
aatgcctccgaagaggacaaggtgtacagcctcacctccttctctgtcgaaagcgacggg
ggctacatggatatgagcaaggatgacttcctggactacgttcccatgtctgatatgaag
ggagagatcaagtatgctgacattgagtcctccaactacggcaccccctacgagctggac
agctattccccctcagctcccgaaaggacggatcgcgtgaccctgataaacgagtccccg
ctcctcagctacacagacctggttgggtttagtttccaggtggccaacgggatggagttc
ctcgcgtccaaaaactgtgtgcaccgagacctggcagcaaggaacgtcctcatctgcgag
gggaagctggtgaagatctgtgactttggcctggccagagatatcatgagagattccaac
tacatctccaaaggcagcaccttcctgcctttgaaatggatggcgcctgagagcatcttc
aacaacctctacacaaccctgagtgatgtgtggtcttttgggatcctcctctgggagata
ttcactctgggtgggactccataccctgaactacccatgaatgagcagttctacaatgcc
atcaaatgtggctatcgaatgtctaaacccacccatgcttccaacgagatctatgacatc
atgcagaaatgttgggaagagaagtttgagataagaccttccttctctcagctggtggta
cttatggggaacctcctggcagatggatacaagaagaggtaccaacaggtcgaggaggaa
ttcctgaagagcgaccaccctgctgttctgcgcacaaggcccagaatcccaggggtcagc
agcgccgggctcacccccagctctggcaccggaagtgtcctctatacagctgtgcagcag
gatgggggggacaatgattacatcatccccctccctgatcccaagcccgacggaatcgat
gacgcccctcaggaggcttctgtcagccgggccagttctactctgaacgaagtgaacaca
gcgtccacaatatcctgcgacagccccctggacctacagcaggaaggggaacaggaacct
gaaccaaagtcgggctgccaggagccaagcccagggcaccacgacatggaagaaagtttt
ctgtag
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integrated database retrieval system
