Caretta caretta (Loggerhead turtle): 125641014
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Entry
125641014 CDS
T09292
Symbol
DHX9
Name
(RefSeq) ATP-dependent RNA helicase A
KO
K13184
ATP-dependent RNA/DNA helicase DHX9 [EC:
5.6.2.6
5.6.2.4
]
Organism
ccay
Caretta caretta (Loggerhead turtle)
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ccay03041
]
125641014 (DHX9)
03012 Translation factors [BR:
ccay03012
]
125641014 (DHX9)
Enzymes [BR:
ccay01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
125641014 (DHX9)
5.6.2.6 RNA 3'-5' helicase
125641014 (DHX9)
Spliceosome [BR:
ccay03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
125641014 (DHX9)
Translation factors [BR:
ccay03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
125641014 (DHX9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
dsrm
OB_NTP_bind
Helicase_C
HA2_N
DEAD
HA2_C
Dicer_dimer
ResIII
AAA_19
AAA_14
nSTAND3
Motif
Other DBs
NCBI-GeneID:
125641014
NCBI-ProteinID:
XP_048716255
LinkDB
All DBs
Position
8:53984472..54025933
Genome browser
AA seq
1317 aa
AA seq
DB search
MRPATTILWRSASEVLRPPAQLPSRQRVEAESLGEEDGRLCSLRGGEGRAMGDVKNFLYA
WCGKRKVTPTYEIRAVGNKNRQKFMCEVRVEGFNYTGMGNSTNKKDAQSNAARDFLNYLV
RLNEIKSEEIPALGAGAADAPDGIVPEARGDAGERVSTLGGPLPPHLALKSETGGGPAAG
VGSSGYGGAQWDRGANLKDYYSRKEEQEAQATLESEEVDLNAGLHGNWTLENAKARLNQF
FQKEKVQGEYKYTQVGPDHNRSFIAEMTIYVKQLGRRIFAREHGSNKKLAAQSCALSLVR
QLYHLGVIEPYTGQTKKKEGETVEPYEVVVSPDLENQLNSIIQELSLELMPQPEDPSCPV
LLNIGKLAHFEPSVRQNQMGVVPWSPPQSNWNPWTSCNIDEGPLAYATPEQISMDLKNDL
MYRLEQDQELQSILQERETLPVKKFETEILDAIHHSPVVVIRGATGCGKTTQVPQYILDE
YIKNGKAAECNIVVTQPRRISAVSVAERVSYERGEEPGQSCGYSVRFESVLPRPHASVMF
CTVGVLLRKLEAGIRGISHVIVDEIHERDINTDFLMVVLRDVVEAYPEIRVILMSATIDT
TMFCEYFFNCPIIEVYGRTYPVEEYFLEDCIQMTQFVPPLKDKKKKDKDEEGGEDDDANC
NLICSDEYGPETKRCMAQLNEKETPFELIEALLKYIETLNVPGAVLVFLPGWNLIYTMQK
HLEMNPHFGSHRYRILPLHSQIPRDEQRRVFDPVPSGVTKVILSTNIAETSITINDVVYV
IDSCKQKVKLFTAHNNMTNYATVWASKTNLEQRKGRAGRVRSGFCFHLCSRTRFERLETH
MTPEMFRTPLHEIALSIKLLRLGGIGQFLAKAIEPPPLDAVIEAEHTLRELDALDSNDEL
TPLGRILAKLPIEPRLGKMMIMGCIFYVGDAVCTISAATCFPEPFISEGKRLGYVHRNFA
GNRFSDHVALLSVFQAWDDARMGGEDAEIRFCEHKRLNMATLRMTWEAKVQLKDILINSG
FPEECLMTQIFNNTGPDNNLDVVISLLAFGVYPNVCYHKEKRKILTTEGRNALIHKSSVN
CPFSSQDMKYPSPFFVFGEKIRTRAISAKGMTLVSPLQLLLFASKKVLSDGEIILVDDWI
KLRMSHDAAACVTALRAAMEALVVEVTKDPEIISQLDPVNERMLNVIRQISRPSAAGINL
MAGNTRFGDGPRPPKMARYDNGGGFRGRGVNQRGSGYRGGGYGGGGYGGGYNSYRGGSGG
RGYQGGSGGGYRGGGGYKGSGGGYRGSGGGYRGYQGGGNRGNYGGGFGGQGRGRGGY
NT seq
3954 nt
NT seq
+upstream
nt +downstream
nt
atgcgccccgcaaccaccattttgtggcgctcagcgagcgaggtgcttcgccccccagcg
cagctacccagccgacagcgggtagaggctgagagtctaggggaggaggacgggcgcctc
tgctctctacgggggggcgaaggccgcgccatgggggacgtgaagaacttcctgtacgcc
tggtgcggcaagaggaaggtgacgccgacctacgagatccgcgccgtgggcaacaagaac
cggcagaagttcatgtgtgaggttcgggtggaaggttttaactacactggaatgggcaat
tccacaaacaagaaagatgcacagagcaatgctgctagggacttccttaattacttagtt
cggttgaatgaaatcaagagtgaagaaattccagctttaggggcaggagctgctgatgct
ccggatggaatagtgcctgaagcacggggagatgctggtgaacgtgtttctactctgggc
ggacctcttcctccacatttggcactgaagagtgaaacaggtggtggtccggctgccgga
gttggaagctctggctatggtggagctcagtgggaccgtggagccaatctgaaggattac
tattcaaggaaagaggagcaggaggcacaggctaccttggagtcagaagaagtggactta
aatgctggtcttcatggaaattggaccttggagaatgctaaggcgcgtctgaaccagttt
ttccaaaaggagaaggtccagggagaatataaatacactcaagtggggcctgatcacaac
aggagctttattgcagaaatgaccatttatgtcaagcagctgggcagaagaatctttgct
cgtgagcatggatcaaacaaaaagctggcagctcagtcctgtgctctgtccctggtcaga
cagctctaccatcttggtgtcatcgagccctacactgggcagacaaagaagaaggaagga
gaaacagtagagccttatgaagtggtggtctctcctgatttggaaaatcagctgaatagc
atcattcaggagctttctcttgagctcatgccacaacctgaagatccaagctgtccagtt
ttgctcaacattggaaagctggcccattttgaaccatccgtgagacagaatcaaatggga
gttgtcccatggtcaccccctcagtcaaactggaacccttggaccagctgcaatattgat
gagggtcctctggcatatgccaccccagagcagataagcatggacttgaaaaatgatctc
atgtaccgcctggagcaggatcaagagttacagagcatcctacaagagagggagacactg
cctgtgaagaaatttgagactgaaattcttgatgcaatccatcacagtcctgttgttgtc
attcgtggtgccactggttgtggcaaaaccacacaggttccacaatacatcctggatgaa
tacatcaaaaacggcaaagctgcagaatgcaacattgtagtaacacaacccaggaggatc
agtgcagtttctgtggcagagcgtgtgtcatatgagagaggagaagaacctgggcaaagc
tgtggatacagtgtacgatttgaatctgtacttccccgcccccatgccagtgtgatgttc
tgcactgtaggtgtcctcctaagaaaactggaggctgggatccgtggaattagtcacgtt
attgtggatgagatccatgagagagacattaatactgacttcctcatggtggtgctgaga
gacgtagttgaggcatatcctgaaatcagagttatccttatgtctgccactattgatacc
accatgttctgtgaatacttcttcaattgccccatcattgaggtctacggtagaacctac
ccagtggaagagtattttctggaagattgtattcagatgactcagtttgttcctccatta
aaggacaagaagaagaaagacaaagatgaagaaggtggtgaagatgatgatgccaactgt
aatcttatatgtagtgatgaatatggtccagaaacaaaacgttgtatggcccagttgaac
gagaaggaaactccctttgagctcattgaggccttgctaaagtacatcgagaccctgaat
gttccaggagctgtgcttgtcttcttgcctggctggaatctgatatacaccatgcaaaag
catctggaaatgaatccacacttcggaagccaccggtacagaattctgcccctgcattca
caaattcctcgagatgaacagcgcagagtgtttgatccagtgccttctggagtgaccaag
gtgattttatccaccaacattgctgagactagcattaccatcaatgatgttgtctatgtt
atagattcttgcaaacaaaaggtgaagctgttcactgctcacaacaatatgacaaactat
gccacagtctgggcatcaaaaactaaccttgagcaacggaaagggcgagctggccgagtg
cggtctggattctgtttccatctgtgcagcagaactcgctttgaaaggcttgaaactcac
atgacacctgaaatgttccgaacaccactgcatgaaattgctttgagcatcaaacttctg
cgtctgggagggattggacaattcttggccaaagcgatagaaccaccacctttggatgca
gtgattgaagcagagcacacgctcagagagctggatgccctggactctaatgatgagttg
acgcctcttgggagaatccttgctaaactccccattgaacctcgcctgggcaagatgatg
ataatgggctgcattttctatgtaggagatgctgtgtgtaccatctctgccgccacctgc
ttccctgagcctttcatcagcgagggtaaacggctgggttacgtccataggaattttgcg
gggaacaggttttcagatcatgtagccttgctttcagtcttccaagcctgggatgatgca
agaatgggcggtgaagatgcagaaatacgattctgtgaacacaaaaggctcaacatggct
acactcaggatgacttgggaagccaaagtccagcttaaagatattcttatcaattctggc
tttccggaagagtgtttgatgactcagatatttaacaacactggaccagataacaatcta
gatgttgtcatctccctgcttgcttttggtgtataccctaatgtctgctaccacaaggag
aagaggaaaattcttaccactgaggggcgcaatgcgcttatccacaagtcatccgtcaac
tgccctttcagcagccaggacatgaagtatccatctcctttctttgtttttggtgaaaag
atccgaacacgagctatctctgccaaaggaatgaccttggtgagcccgctgcagctgctt
ctgtttgcctcaaagaaagtcttatccgatggagagatcattctggtggatgactggatt
aaattgcggatgtctcatgatgcagctgcttgtgtcactgccctacgtgcagcaatggaa
gctcttgttgttgaagtaactaaagatcctgaaatcattagccagctggacccagtgaat
gagcgaatgctgaatgtgatccgccaaatctccaggccttcagcggctggcatcaacctc
atggcgggcaacacaaggtttggagatggtcctcgtccccccaaaatggctcgatatgac
aatggaggtggattcagaggacggggagttaaccagcgtggctctggctacagaggtgga
ggctatggtggtggaggctatggcggtggatataactcataccgaggtggctctggagga
agaggataccaaggtggctctgggggaggttatagaggtggtgggggatataaagggtct
gggggagggtatcgaggctcgggtgggggatatagagggtaccagggtggtgggaataga
ggtaactatggaggtgggtttgggggccaaggaagggggcgtggtggttattga
DBGET
integrated database retrieval system
