Caretta caretta (Loggerhead turtle): 125641723
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Entry
125641723 CDS
T09292
Symbol
PTPRF
Name
(RefSeq) receptor-type tyrosine-protein phosphatase F isoform X1
KO
K05695
receptor-type tyrosine-protein phosphatase F [EC:
3.1.3.48
]
Organism
ccay
Caretta caretta (Loggerhead turtle)
Pathway
ccay04514
Cell adhesion molecules
ccay04520
Adherens junction
ccay04910
Insulin signaling pathway
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
125641723 (PTPRF)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
125641723 (PTPRF)
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
125641723 (PTPRF)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ccay01009
]
125641723 (PTPRF)
Enzymes [BR:
ccay01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
125641723 (PTPRF)
Protein phosphatases and associated proteins [BR:
ccay01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Classical)
Receptor PTPs
125641723 (PTPRF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Y_phosphatase
fn3
I-set
Ig_3
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
Ig_2
ig
fn3_2
PTP-SAK
Interfer-bind
Tc-R-P
V-set
DSPc
Y_phosphatase3
C2-set_2
PTPlike_phytase
PTP-NADK
Ig_C17orf99
Fn3_PTPRU
Insulin_TMD
DUF3377
ICAM_N
TMEM154
Motif
Other DBs
NCBI-GeneID:
125641723
NCBI-ProteinID:
XP_048718019
LinkDB
All DBs
Position
8:complement(107072368..107683711)
Genome browser
AA seq
1914 aa
AA seq
DB search
MVPHFCVPVFLVPAVVLCCLMPSMEADSKPSFMKAPEDQIGISGGVASFVCQATGEPKPR
ITWMKKGKKVSSQRFEVIEFDDGSGSVLRIQPLRVHRDEAIYECTATNSVGEINTSAKLT
VLEEDHLPSGFPTIDMGPQLKVVEKARTATMLCAASGNPDPEISWFKDFLPVDTGTSNGR
IKQLRSGGTPIRGALQIENSEESDQGKYECVATNSAGTRYSAPANLYVRVRRVAPRFSIP
PSNHEVMPGGSVNLTCVAVGAPMPYVKWMAGVEELTKEDEMPVGRNVLELNNIVQSANYT
CVAISSLGMIEATAQITVKALPKPPTEPLVTETTATSVTLTWDSGNSDPISYYVIQYKPK
SWEGQFQEVDGVATTRYSIGGLSPFSEYEFRIIAVNNIGRGPPSELVEARTGEQAPSSPP
LKVQARMLSASTMLVQWEQPEEPNGQIRGYRVYYTTDPHLPLSMWQKHNTDDSHLTTVGS
LITGTTYSIRVLAFTSVGDGPPSDIIQVKTQQGVPAQPADFQAEAESDTRILLTWLPASQ
ERITKYELLYWEGEDGSQHKVDFDPSSSYAVEGLKPDTLYKFQLGARSELGLGVYTPVIE
ARTAQSTPSAPPQEVECVSTSSTTIRVSWVPPPAQSRHGVITQYSIAYQAVDAEDSAKHV
VDGIGRERSSWEIKDLEKWTEYKVWVRAHTDVGPGPESSPVHVRTDEDVPSAPPRKVEVE
SVNSTAIRVSWKLPLSNKQHGQIRGYQVTYVKLENNEPQGQPVIKDVMLAEAQWRAEDSI
DHETIIGGLLPETTYSVTVAAYTTKGDGARSKPKVVTTTGAVPGKPTMMISTTAMNTALI
QWHPPKEMVGELLGYRLQYKRTDEEKMNIMDFGKNDHHYTVTRLHKGATYIFKLSAKNRA
GPGEEFEKEITTTEDLPSGFPQNLRVVGLTTSTTEVAWDPPVLAERNGRITNYTVMYRDI
NSQQELTNVTKDTSIMLTNLRPDTTYDIKVRASTSKGVGPLSPSIQSRTMPVEQVFAKNF
RVNAVMKTSVLLSWEVPDSYKSVVPFKILYNSQSVEVDGHSMKKLISDLQPDTEYSFVLM
NRGSSAGGLQHRVSIHTAPDVLQNKPISTNKYMQEGKFTLTLPKVQTSAPVRWYYIVVVP
VGQTTSSRAARWRTPDEMELDQLLEAISQGRRQRRQADRLKPYIAAQVDVLPETFTLGDE
KTYKGFYNKPLSEDLSYRCFVLASLEDGETKRYAASPYSDEIVMEVSSAKQQDEPEMLWV
MGPVLAVILIIIIVIAILLFKRKRANSPSSKDEHSIGLKDSLLAHSSDPVEMRRLNYQTP
GSSVPSCPNISSMRDHPPIPVTDLADNIDRLKANDGLRFSQEYESIDPGQQFTWENSNLE
VNKPKNRYANVIAYDHSRVILTSVDGVPGSDYINANYIDGYRKQNAYIATQGPLPETLSD
FWRMVWEQRTATIVMMTRLEEKSRVKCDQYWPGRGTETYGLIQVTLLDTVELATYTVRTF
ALYKNGSSEKRELRQFQFMAWPDHGVPEYPTPILAFLRRVKACNPPDAGPMVVHCSAGVG
RTGCFIVIDAMLERMKHEKTVDIYGHVTCMRSQRNYMVQTEDQYIFIHEALLEAATCGNT
EVPARNLFAHLQKLSQVPLGESVTAMELEFKLLASSKAHTSRFISANLPCNKFKNRLVNI
MPYELTRVCLQPIRGVEGSDYINASFIDGYRQQKAYIATQGPLAETTEDFWRMLWEHNST
IVVMLTKLREMGREKCHQYWPAERSARYQYFVVDPMAEYSMPQYILREFKVTDARDGQSR
TIRQFQFTDWPEQGVPKTGEGFIDFIGQVHKTKEQFGQDGPITVHCSAGVGRTGVFITLS
IVLERMRYEGVVDMFQTVKTLRTQRPAMVQTEDQYQLCYRAALEYLGSFDHYAT
NT seq
5745 nt
NT seq
+upstream
nt +downstream
nt
atggtgcctcacttctgtgtcccagtattccttgtaccagcagtagttctgtgctgcttg
atgccttcaatggaggcagacagcaagccaagctttatgaaagctcccgaagatcagatt
gggatttctggaggagtggcctcgtttgtgtgccaggcgacaggagagcccaagcctcgc
atcacatggatgaagaaagggaagaaggtcagctcccagcggtttgaggttattgagttc
gatgatgggtcaggatcagttctccggattcaacccctgcgtgttcatcgagatgaagca
atctatgagtgcacagcaaccaacagtgttggggagataaacaccagtgccaaattaaca
gtgttagaagaagatcacctcccatctggctttccaaccattgacatgggcccgcagctg
aaggtggtagaaaaggcccgcacagccacaatgctctgcgctgccagtggcaaccccgat
cctgaaatctcttggttcaaggacttccttcctgtggatacaggaactagcaatgggcgc
atcaagcagctccgttcaggtggtacaccaatcagaggagctctgcaaatagagaacagc
gaggagtctgaccaaggcaaatatgaatgtgttgcaaccaacagtgcaggaacccgctac
tctgctccagctaacctttacgttcgagtgcggcgtgtcgcacctcgattctcgatccct
ccgagcaaccacgaggtgatgcctggggggagcgtgaacctcacatgtgtggccgtgggt
gcaccaatgccctacgtgaagtggatggctggtgtggaggaactgaccaaagaagatgag
atgcctgtcggcaggaatgtcctggagttgaacaacattgtgcagtccgccaactacacc
tgcgtggccatctcctctctcggcatgatcgaagccacggcccagatcactgtcaaagcg
ctgccgaagccaccgacggagccactggtgactgagacaacagccaccagcgtgaccctc
acctgggactctggcaactcagaccccatctcttactatgtcatccagtacaagcccaag
tcctgggagggccagttccaggaggtggacggcgtagcgacaacccgctatagcattggt
ggcctcagccccttctcggagtatgagttccgcatcattgccgtcaataatattggaagg
gggcctcctagcgaactggtggaggcacggaccggagagcaggctccttccagcccaccc
ctgaaggtccaggcacggatgctgagtgccagcaccatgcttgttcagtgggagcagcca
gaggagcccaacggacagatccgaggataccgggtttactacactacggacccgcatctg
cctctgagcatgtggcagaaacacaacacagacgacagtcacctcaccactgtgggcagc
ctaatcacagggaccacctacagcatccgtgtcttggccttcacctccgtgggagatggg
cctccctcagacatcatccaggtcaaaactcagcagggggttccagcccagccagctgat
ttccaggcagaggcagagtctgatacccggatcctgctgacgtggctcccggcctcacag
gaacgcattacaaaatacgagctgctgtactgggaaggagaggatgggagtcagcacaag
gtggactttgacccaagctcgtcgtacgcagtggaaggtctcaagcctgacacgctgtac
aagttccagctgggagcccgttcggagctggggctgggggtgtacaccccagtcatagaa
gccagaactgcccaatccaccccttccgccccaccccaagaagtcgagtgcgtaagcacc
agctccactaccatccgggtaagttgggtaccaccgcctgctcagagccgccatggggtc
atcacgcagtactccattgcgtaccaggcggtggacgcagaggacagcgccaagcacgta
gtggatggaattggacgggaacgctccagctgggagatcaaggacctggagaaatggaca
gaatacaaggtgtgggtgcgggcccacacagatgtggggcctggaccggagagctccccg
gtgcatgtgcgcactgatgaggacgtgcccagcgcccccccacgaaaagtggaggtggag
tctgtgaattcaacagccatccgggtcagctggaaactgccgctctccaacaagcagcat
ggacagatccgggggtaccaggtcacttacgtgaagctggagaacaatgaaccgcaaggg
cagcctgttatcaaagatgtcatgttagcagaggcccagtggagggctgaggactccatc
gaccatgaaaccatcataggaggccttcttcctgaaaccacctattccgtcactgtcgca
gcctataccaccaagggagatggggcacgcagcaaacccaaagtcgtcactacgacaggg
gcggtcccaggcaagcccaccatgatgattagcacaacagccatgaacaccgctctcatc
cagtggcacccccccaaggagatggtcggggagctgctggggtaccggctgcagtacaaa
cgcaccgacgaggagaagatgaacatcatggactttgggaaaaatgaccatcactacact
gtgaccaggctgcacaaaggtgccacctacatcttcaagctgtctgccaagaacagagcc
ggtccaggggaggagtttgagaaggagatcaccacgacagaggacttgcccagtggcttc
ccgcagaacctgcgtgtggttgggctcaccacctccaccacagaggtggcctgggacccc
ccagtgctggcagagcgaaatgggagaattaccaactacacggttatgtacagagacatc
aacagccagcaggagctgaccaatgtcaccaaggacacgagcatcatgctgaccaacctc
agacctgacaccacctatgacataaaagtgagggccagcaccagcaagggggtggggccg
ctcagccctagcatccagtcccggaccatgcctgttgagcaagtgtttgctaaaaacttc
cgcgtcaacgccgtgatgaaaacatcagtgttgctgagctgggaagtgcctgattcctac
aagtcggtggtgcctttcaagatcctgtacaacagccagagtgtggaggtggacggccat
tcgatgaagaagctcataagtgaccttcagccggatacggagtattcctttgtgctaatg
aaccgtggcagcagcgctggtgggctccagcaccgggtatctatccacacggctcctgat
gtcttgcagaacaaacccatctccacaaacaaatacatgcaggaaggaaagttcaccctc
acccttcccaaagtccagacctcagcgccagttaggtggtactatattgtggttgtgccc
gtgggtcagaccaccagcagccgcgcagcccggtggcggacgcctgatgagatggagctg
gaccagttactggaggccatcagccagggcaggcgtcagcgccgtcaagcagacaggctg
aagccctatatcgctgctcaagtggatgtgctgccggagaccttcaccttgggagacgag
aagacctacaagggcttctacaacaagccgctctccgaggatctgagctaccgctgcttc
gtgctggcgtcgctggaggatggcgagacgaagaggtacgcagccagcccctactcggat
gagatcgtgatggaagtgtcttcagcaaagcagcaggacgagcccgagatgctgtgggtg
atgggaccggtgctggccgttatattaatcatcatcatcgtcattgctatcctgctcttc
aaaaggaaaagagccaactccccctcatcaaaggacgagcactccatcggcctcaaggac
tccctgctggctcactcctctgaccctgtcgagatgagacgcctcaattaccagacccca
ggttccagtgtccccagttgcccgaatatctcaagtatgcgagaccacccgccaatcccg
gtgacggatctcgctgacaacatcgacaggctgaaggccaacgacgggctgaggttctcc
caggagtacgagtccatcgatccagggcagcagttcacctgggagaactccaacctggaa
gtgaataaaccaaaaaaccgctatgcaaacgtgatcgcctatgaccactcacgtgtcatc
ctgacctctgtcgatggggtgcccggcagtgactacatcaatgctaattacatcgatggg
taccggaagcagaatgcttacattgctactcaggggcccctgccagagacgctcagcgac
ttctggaggatggtgtgggagcagaggacagcgaccatagtcatgatgacccggctggag
gagaaatccagggtgaagtgtgaccagtactggccaggccggggcacagagacctacggg
ctgattcaggtgacgctgctggacacagtcgagctggctacctacaccgtccggacgttt
gcactctacaagaatggctccagcgagaaacgagagttacgccagttccaattcatggcg
tggccggatcatggggtgccggagtaccccacccccatcctcgccttcctgcgccgggtg
aaagcctgtaacccccctgacgctgggcccatggttgtccattgcagcgctggcgtgggc
aggacgggctgcttcattgtcatcgatgccatgctggagaggatgaagcatgagaagacg
gtcgacatctatggccacgtgacgtgcatgagatctcagcgtaactacatggtgcagacc
gaggaccaatacatcttcatccacgaggccttgctggaggcagccacctgcggcaacacc
gaggtacccgcacgcaacctctttgctcacctccagaagctgagccaggtgcccctgggc
gagagcgtcactgcaatggagctggaattcaagctcttggccagttccaaagcacatacc
tcgcggttcatcagtgccaaccttccatgcaacaaatttaagaaccgcctggtgaacatc
atgccgtacgagctgaccagagtctgcctgcagcccatccgtggggtcgagggctccgat
tacatcaacgccagcttcatagatggctacaggcagcagaaagcctacattgctacgcag
gggcccctggcggagaccacggaggatttctggcgcatgctgtgggagcataactccacc
atcgtggtgatgctgaccaagctgcgcgaaatgggccgggaaaagtgccaccagtactgg
ccagcggagcgctctgcccgctaccagtacttcgtggtggaccccatggcagagtacagc
atgccccagtacatcctccgcgagttcaaggtcactgatgccagggatgggcaatcacgg
accatccgccagttccagttcacagactggcccgagcagggagtgccgaagaccggtgag
ggcttcattgacttcatagggcaggtgcacaaaaccaaggagcagtttggccaggacggg
cccatcacggtgcactgcagtgccggggtcgggcgcacaggagtgttcatcacgctcagc
atagtcctggagcgcatgcgctatgaaggggtggttgacatgttccagacggtgaagacc
ttgcgaacgcagcgaccagccatggtgcagacagaggaccagtaccagctgtgctatcga
gcagcgctggagtatctcggcagctttgaccactatgcaacgtaa
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integrated database retrieval system
