Caretta caretta (Loggerhead turtle): 125642670
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Entry
125642670 CDS
T09292
Name
(RefSeq) vascular endothelial growth factor receptor kdr-like isoform X1
KO
K05096
FMS-like tyrosine kinase 1 [EC:
2.7.10.1
]
Organism
ccay
Caretta caretta (Loggerhead turtle)
Pathway
ccay04010
MAPK signaling pathway
ccay04020
Calcium signaling pathway
ccay04510
Focal adhesion
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
125642670
04020 Calcium signaling pathway
125642670
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
125642670
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
ccay01001
]
125642670
Enzymes [BR:
ccay01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
125642670
Protein kinases [BR:
ccay01001
]
Receptor tyrosine kinases (RTK)
VEGFR family [OT]
125642670
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Ig_3
I-set
ig
Pkinase
Ig_2
V-set
VEGFR1-3_N_Ig-like
VEGFR-2_TMD
Ig_VEGFR-1-like_5th
VEGFR-1-like_Ig-like
Ig_4
Ig_5
C1-set
C2-set_2
Haspin_kinase
Motif
Other DBs
NCBI-GeneID:
125642670
NCBI-ProteinID:
XP_048720305
LinkDB
All DBs
Position
9:70214570..70398642
Genome browser
AA seq
1333 aa
AA seq
DB search
MTPKPCTALAVSMLHGLLWLQGLALEEVLLKPELSITEDQIVINAGDFFAITCRGAASLT
WLWGNEPHKDVPHRWHISEHQCSDNVQQICSRLTINKAIASDTGYFTCVYNHLLSNKDLM
AKTYVFVTDNQNPFVQIHPEYPKVIYVLNTTEVVVIPCRVTSPDIKPKLRQLPSSSEFSY
WRMVWDPKRGFVIPSPPFHFFKGILKCTTKVNGIESSSYYMPQKVEGRIQNLALKANPRK
LLVGDTLSLECSAETFFNGRIEFEWQCPGGRDHKPIPILNKSQSVYKGFSNLTIQNITME
DSGLYVCRVVNVTGLETNVMGLKANVTITVYNKAFLRVSYKKGPYYEGIAGHKLLKLAVK
VDAFPRPTVTWYKDGKPIKENHTCYVPDPMKYKLGIRDLRPEHAGNYTIVLSNTKHGLHE
NLTIQLVVTERPKIYEKETDFDKVVQVNLGSTQTLQCTASGTPDPKIMWEWEPCAPADTL
CRHRGKRIVQKNISEADMWTGNKIESIEEKYIMHGDKKKIISKLTTEHSNASGIYYCVAS
NKIGKEERSIKFYVSDVKSGLQTDRPITTIVGSDVQLTCRASRYIYNHLAWYYPSAQVVP
ASFMQEQIDKYSISLTLAISNVTKEHAGWYKCSAQNRHNSTEVQEQHTQLNVKAKAVPHI
MQNLADREVNVSGKIMLECRVNGTPTPHIAWWKNGYPISPASGISMENNTLVIERVKKDD
EGLYECRASNEMGNDSTSAFIKIQGSEEKSNIEVIILVCTGLAATLFWLLLTLFIRKMRK
PDATDIKTGYLSIIMDPEEMPLDEQCDRLPYDSSKWEFPRDRLRLGKTLGHGAFGKVVEA
SAFGIDKSSTCKTVAVKMLKAECATTNECKALMSELKILIHIGHHLNVVNLLGACTKAGG
PLMVIVEYCKYGNLSNYLRGKRGDFVAYKSQENSDQAEKSLDESNSDLTELIKRRLESVA
STGSSASSGFIEDKSYSDSEEEEEDGEDLQKRPLTLEDLICYSFQVAKGMEFLASRKCIH
RDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPEAIFDKIYTTQS
DVWSFGVLLWEIFSLGASPYPGVQIDEDFCRRLKEGTRMRSPEYSTPEIYQTMLDCWHGV
ATERPTFTELVERLGDLLQANVQQDGKDYIPLNITLCPDGESNPKTCPVEENLSNCINRW
SALGIGNNSKKRPLSVKTFDEVPVEKQKVMNEESESDSGMVLTSDEMKSLKRLEIRSWPY
GIMALAQRAVSKSKESMLSEHEIVKYQPAVQTDEDTMDFTLEDSVLLPMDPNLECHSPPP
DYNSVIHYSAPPV
NT seq
4002 nt
NT seq
+upstream
nt +downstream
nt
atgactccaaagccctgcaccgccctggctgtttctatgcttcacggactgctttggcta
caaggtcttgctctggaagaagtgctactgaaaccagagttaagcattacagaagatcaa
attgtaatcaatgcaggagatttcttcgctataacatgcaggggagcagcctccttgacc
tggctatggggaaatgaaccacacaaagacgtgccacacaggtggcacatatccgagcac
cagtgttcagacaacgtacagcagatctgcagcaggctcacaatcaacaaagccatagcc
agcgacaccggttacttcacctgtgtttataatcacctcctttctaacaaagacctcatg
gccaagacgtatgtgttcgttacagacaaccagaatccatttgttcagattcaccctgaa
tatcccaaagtgatatatgtattgaatactactgaagtggttgtcataccctgccgcgtc
acctcaccagatatcaaacccaagcttcgacagcttccttcttcttcagagttcagctac
tggaggatggtgtgggaccccaagagaggatttgtcatcccctctcctcctttccacttc
ttcaaaggcatactcaagtgtacaaccaaagtaaacggaattgagtcctcatcctactac
atgccacagaaagtggagggcagaatacagaacctggctctgaaagcaaaccccagaaag
ctgctggttggagataccctcagcctggaatgcagcgcagagacctttttcaatggacgg
attgaatttgaatggcagtgccctggggggagagatcataagcctataccaattttgaac
aaaagtcagtcagtgtataaaggcttcagtaatctgaccatccagaacattaccatggaa
gacagtggcttgtacgtatgcagagtagtcaacgtaacaggactggagaccaatgtaatg
ggactgaaggccaatgttacaatcacagtatacaacaaagctttcctgagagtttcctat
aagaaaggaccctactatgaggggatagcaggacacaagttactgaaactagctgtgaag
gtggatgcctttccccgccccactgttacctggtataaagatggcaagccaatcaaggag
aaccacacttgctatgtaccagatccaatgaagtacaagctgggcataagggatttgaga
ccagagcatgctgggaactacaccatagtcctgagcaacactaaacatggcctacatgag
aacctcaccatccagctggtagtgacagagaggcccaaaatctatgaaaaggagacagac
tttgacaaggtcgtacaagtgaatcttggaagcacacaaacccttcagtgcactgcgagc
ggaactccagaccccaagatcatgtgggaatgggagccatgcgcccctgcagacacgctc
tgcagacaccgtggaaaaagaattgttcagaaaaacatcagtgaggcagacatgtggaca
ggcaacaaaatcgagagcattgaggagaaatacataatgcatggagataaaaaaaagatc
ataagcaagttgactacagaacatagcaatgcatcagggatctattactgtgtggcttca
aacaagattggtaaagaggagagaagcatcaagttctatgtctcagatgtaaaatcgggt
ctgcagacagaccgaccgatcaccaccattgttgggagtgatgttcagctgacctgcaga
gcctccagatacatttacaatcacctggcatggtactacccctccgcacaggtcgtgcct
gccagcttcatgcaggagcaaattgacaaatactccatttccttgacactggccattagt
aacgtcacaaaggaacacgctggatggtacaagtgcagcgctcagaatcgacacaacagc
acggaagtgcaagaacagcacacccagctcaacgttaaagcaaaggcagtgccacatatt
atgcagaacctcgcagaccgggaggttaacgtcagtggcaagatcatgctggagtgcaga
gtaaatggaaccccaacgcctcatattgcgtggtggaaaaatggctaccccatttcacct
gcttcaggaatttccatggaaaataacaccctggtcatcgaacgagtgaaaaaagatgat
gaaggcctctatgagtgtagggcttccaatgaaatgggcaatgacagcacttcagcattt
attaaaatacaaggctctgaagaaaagtccaatattgaagttatcattttggtctgcact
ggtctagcagctacccttttttggcttcttctgacccttttcattcggaaaatgagaaaa
ccggatgccacagatattaaaacaggatacctgtcaatcataatggacccagaggaaatg
ccccttgacgagcagtgtgaccgtctgccatatgacagcagtaaatgggagtttccaaga
gacaggctgcggcttggtaaaacactgggtcacggtgctttcgggaaggtcgtggaggca
tctgcttttggtatcgataaatcttcaacctgcaaaacagttgccgttaaaatgcttaaa
gcagaatgcgcaactacaaatgagtgcaaggctttaatgtccgagctgaagatcctcatc
cacataggacaccatctgaacgtggtcaacctgctgggagcctgcaccaaagcaggaggt
cctttaatggttatcgtagaatattgcaaatatggaaatctgtctaattacctgagagga
aaacgaggggactttgttgcatataagtcccaggagaactctgaccaagcagagaaaagt
ctggatgagtccaacagtgatttaacagagctgatcaagaggcgccttgagagtgtggcc
agcacgggaagctcagccagttcaggattcattgaagataagagttacagtgactccgaa
gaggaagaagaagatggtgaggatctgcaaaagcgaccactgaccttggaggatctgatt
tgctatagcttccaggtggcaaaaggcatggagttcctggcctccagaaaatgtattcat
cgggatttggcagcaaggaacatccttctgtcggaaaacaacgtggttaagatctgtgac
tttggactggctagggatatttacaaagatcctgactatgtacggaaaggagatgcaaga
cttccacttaaatggatggctccagaggctatttttgataaaatttatactacgcagagt
gacgtgtggtcttttggtgtgttactatgggaaatattttctctgggtgcctcaccatac
ccaggagtgcaaattgatgaggacttttgccgccgcctcaaagaaggaacacggatgaga
tcgccagaatattccactccagaaatctaccagactatgctggattgttggcatggagtt
gccacagagcggcccaccttcacagagctggttgaacgcttaggagacctcctccaggca
aacgtgcaacaggatggtaaagactatattccactgaacatcacattatgccctgatgga
gaatctaacccaaagacctgcccagtggaagaaaacttgagcaattgcattaatcgctgg
agtgcattgggaataggtaataacagtaagaagagaccgctgagtgtgaagacatttgat
gaggtgccagtggagaagcagaaagtaatgaatgaggagagcgagtcggatagcgggatg
gtgctgacatcggatgagatgaaaagcctgaagaggctggaaatccgctcctggccttat
gggattatggctctagcgcagagagctgtcagcaagagcaaagaatccatgttatcagag
catgagattgtgaaataccagccagcagtacagactgatgaggacaccatggacttcaca
ctggaagactcagtcctcctgcccatggatccaaacctggaatgccacagcccaccgccc
gactacaactccgtcatccactattctgcccctccagtgtaa
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