Caretta caretta (Loggerhead turtle): 125643930
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Entry
125643930 CDS
T09292
Symbol
PDGFA
Name
(RefSeq) platelet-derived growth factor subunit A isoform X1
KO
K04359
platelet-derived growth factor subunit A
Organism
ccay
Caretta caretta (Loggerhead turtle)
Pathway
ccay04010
MAPK signaling pathway
ccay04020
Calcium signaling pathway
ccay04510
Focal adhesion
ccay04540
Gap junction
ccay04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
125643930 (PDGFA)
04020 Calcium signaling pathway
125643930 (PDGFA)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
125643930 (PDGFA)
04540 Gap junction
125643930 (PDGFA)
09142 Cell motility
04810 Regulation of actin cytoskeleton
125643930 (PDGFA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
ccay04052
]
125643930 (PDGFA)
00536 Glycosaminoglycan binding proteins [BR:
ccay00536
]
125643930 (PDGFA)
Cytokines and neuropeptides [BR:
ccay04052
]
Cytokines
Growth factors (RTK binding)
125643930 (PDGFA)
Glycosaminoglycan binding proteins [BR:
ccay00536
]
Heparan sulfate / Heparin
Growth factors/receptors
125643930 (PDGFA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDGF_N
PDGF
DUF2112
KH_PARP14_8
Motif
Other DBs
NCBI-GeneID:
125643930
NCBI-ProteinID:
XP_048723170
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All DBs
Position
10:complement(71533564..71563087)
Genome browser
AA seq
211 aa
AA seq
DB search
MRTWACILLIGFCYLPFAFPEEAEIPQELIERLAHSEIHSIRDLQRLLEIDSVGYDDVSE
TNLRSHSIHSAKHVQENHPVPIRRKRSIEEAIPAVCKTRTVIYEIPRSQIDPTSANFLIW
PPCVEVKRCTGCCNTSSMKCQPSRIHHRSVKVAKVEYVRKKPKLKEVLVRLEEHMECTCT
PSNSNSDYREEETGRPRETGKKRKRKRLKPT
NT seq
636 nt
NT seq
+upstream
nt +downstream
nt
atgaggacctgggcttgcattttgctgatagggttttgctaccttccctttgcgtttcct
gaggaagctgaaatccctcaggagctaatcgagaggctggctcacagcgaaatccacagc
atccgcgatttgcagcgcctcctggagattgattccgtaggatatgatgatgtttcagaa
acaaacttgagatctcatagtattcattctgctaaacatgttcaagagaatcaccctgta
cccattcgcagaaaaagaagcattgaggaagccattcctgccgtctgcaaaacaagaact
gttatatacgagatacctcggagtcagatcgatcccacgtctgctaatttcctgatatgg
ccaccgtgtgtggaggtgaaacgttgtactggctgttgcaataccagcagcatgaaatgc
cagccatcacggatacatcacagaagtgtcaaggtggcaaaagtggagtatgttagaaaa
aagccaaaattaaaagaagttctggtgaggttagaagagcatatggaatgcacctgcaca
ccatcaaattctaattcagattatcgagaagaggagactggaaggcctagggaaacaggt
aaaaaacggaaacgaaaaaggttaaaaccaacataa
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