Caretta caretta (Loggerhead turtle): 125643930
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Entry
125643930 CDS
T09292
Symbol
PDGFA
Name
(RefSeq) platelet-derived growth factor subunit A isoform X1
KO
K04359
platelet-derived growth factor subunit A
Organism
ccay
Caretta caretta (Loggerhead turtle)
Pathway
ccay04010
MAPK signaling pathway
ccay04020
Calcium signaling pathway
ccay04510
Focal adhesion
ccay04518
Integrin signaling
ccay04540
Gap junction
ccay04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
125643930 (PDGFA)
04020 Calcium signaling pathway
125643930 (PDGFA)
09133 Signaling molecules and interaction
04518 Integrin signaling
125643930 (PDGFA)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
125643930 (PDGFA)
04540 Gap junction
125643930 (PDGFA)
09142 Cell motility
04810 Regulation of actin cytoskeleton
125643930 (PDGFA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
ccay04052
]
125643930 (PDGFA)
00536 Glycosaminoglycan binding proteins [BR:
ccay00536
]
125643930 (PDGFA)
Cytokines and neuropeptides [BR:
ccay04052
]
Cytokines
Growth factors (RTK binding)
125643930 (PDGFA)
Glycosaminoglycan binding proteins [BR:
ccay00536
]
Heparan sulfate / Heparin
Growth factors/receptors
125643930 (PDGFA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDGF_N
PDGF
DUF2112
KH_PARP14_8
Motif
Other DBs
NCBI-GeneID:
125643930
NCBI-ProteinID:
XP_048723170
LinkDB
All DBs
Position
10:complement(71533564..71563087)
Genome browser
AA seq
211 aa
AA seq
DB search
MRTWACILLIGFCYLPFAFPEEAEIPQELIERLAHSEIHSIRDLQRLLEIDSVGYDDVSE
TNLRSHSIHSAKHVQENHPVPIRRKRSIEEAIPAVCKTRTVIYEIPRSQIDPTSANFLIW
PPCVEVKRCTGCCNTSSMKCQPSRIHHRSVKVAKVEYVRKKPKLKEVLVRLEEHMECTCT
PSNSNSDYREEETGRPRETGKKRKRKRLKPT
NT seq
636 nt
NT seq
+upstream
nt +downstream
nt
atgaggacctgggcttgcattttgctgatagggttttgctaccttccctttgcgtttcct
gaggaagctgaaatccctcaggagctaatcgagaggctggctcacagcgaaatccacagc
atccgcgatttgcagcgcctcctggagattgattccgtaggatatgatgatgtttcagaa
acaaacttgagatctcatagtattcattctgctaaacatgttcaagagaatcaccctgta
cccattcgcagaaaaagaagcattgaggaagccattcctgccgtctgcaaaacaagaact
gttatatacgagatacctcggagtcagatcgatcccacgtctgctaatttcctgatatgg
ccaccgtgtgtggaggtgaaacgttgtactggctgttgcaataccagcagcatgaaatgc
cagccatcacggatacatcacagaagtgtcaaggtggcaaaagtggagtatgttagaaaa
aagccaaaattaaaagaagttctggtgaggttagaagagcatatggaatgcacctgcaca
ccatcaaattctaattcagattatcgagaagaggagactggaaggcctagggaaacaggt
aaaaaacggaaacgaaaaaggttaaaaccaacataa
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