Caretta caretta (Loggerhead turtle): 125644288
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Entry
125644288 CDS
T09292
Symbol
LFNG
Name
(RefSeq) beta-1,3-N-acetylglucosaminyltransferase lunatic fringe
KO
K05948
fringe [EC:
2.4.1.222
]
Organism
ccay
Caretta caretta (Loggerhead turtle)
Pathway
ccay00514
Other types of O-glycan biosynthesis
ccay04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
125644288 (LFNG)
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
125644288 (LFNG)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
ccay01003
]
125644288 (LFNG)
Enzymes [BR:
ccay01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.222 O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase
125644288 (LFNG)
Glycosyltransferases [BR:
ccay01003
]
Glycan extension
O-Glycan
125644288 (LFNG)
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Gene cluster
GFIT
Motif
Pfam:
Fringe
Galactosyl_T
DUF2785
Motif
Other DBs
NCBI-GeneID:
125644288
NCBI-ProteinID:
XP_048723949
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All DBs
Position
10:73926820..73947474
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AA seq
380 aa
AA seq
DB search
MLKSCGRKLLWFLVGCMFTCLLVLMADQQKRQVGGLGGEGGRRALRSSASPAPAPARQPQ
RQEGEPGSAPREVKSFTDYFSKLSRGRREAQEAGSLAPRREGTPGPALEDITAQDVFIAV
KTTKKFHQARLELLLDTWISRNRDLTFIFTDGEDEELKKRTANVINTNCSAAHSRQALSC
KMAVEYDKFIESGRKWFCHVDDDNYVNVRTLVKLLSGYPHTQDIYIGKPSLDRPIQATER
ISENKMHPVHFWFATGGAGFCISRGLALKMSPWASGGHFMSTAEKIRLPDDCTIGYIIES
VLGVKLIRSNLFHSHLENLHQVPKTEIHKQVTLSYGMFENKRNSIHMKGAFSADEDPSRF
RSIHCLLYPDTPWCPLNVVY
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atgctgaagagctgcggaaggaaactgctctggttcctggtcgggtgcatgttcacctgc
ctcttggtcctgatggcggatcagcagaagcggcaggtggggggcctgggaggagaaggg
ggccggcgggctttgcggagctcggcgagcccggccccggccccggcccgccagccgcag
cggcaggagggcgagcccggctcggccccccgagaagtgaagagcttcaccgattacttc
agcaagctgagccggggccggcgggaggcgcaggaagccggcagcctggccccgcgccgg
gaggggacccccgggccggccctggaggacatcacggcccaagacgtcttcatcgcggtg
aagaccaccaagaagttccaccaggccaggctggagctgctgctggacacctggatctcc
cggaacagagacttgaccttcatcttcactgatggggaggatgaggaactgaagaaacgc
acagccaatgtcatcaacaccaactgttccgctgctcacagccgccaggctttgtcttgc
aagatggccgtggagtacgacaagttcatcgagtctgggagaaagtggttttgccatgtg
gatgatgataactatgtgaatgtccggaccctggtgaagttgctgtctggctacccccac
acacaggacatctacattggcaaacctagtctggaccgacccattcaagccacagagagg
atcagtgagaacaagatgcatcctgttcatttctggtttgccactgggggagcaggtttc
tgtattagtcgcgggctggcgctgaagatgagcccatgggcgagtgggggtcatttcatg
agcactgcagagaagatccgcctgccagatgactgcaccatcgggtacatcatagagtcc
gtgctaggagtgaagcttatccggagtaatctcttccactcccacctggagaacctccat
caggtgcccaagacagagattcacaaacaggtgacattgagctatggcatgtttgaaaac
aagaggaattccatccacatgaagggagctttctctgctgatgaggatccatccaggttc
cgctccattcactgcctgctgtacccagacacgccatggtgccccctgaatgtggtgtac
tag
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