Clostridium cellulovorans: Clocel_4189
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Entry
Clocel_4189 CDS
T01294
Name
(GenBank) Radical SAM domain protein
KO
K10026
7-carboxy-7-deazaguanine synthase [EC:
4.3.99.3
]
Organism
ccb
Clostridium cellulovorans
Pathway
ccb00790
Folate biosynthesis
ccb01100
Metabolic pathways
Module
ccb_M00988
PreQ1 biosynthesis, GTP => 7-Aminomethyl-7-deazaguanine
Brite
KEGG Orthology (KO) [BR:
ccb00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00790 Folate biosynthesis
Clocel_4189
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ccb03016
]
Clocel_4189
Enzymes [BR:
ccb01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.99 Other carbon-nitrogen lyases
4.3.99.3 7-carboxy-7-deazaguanine synthase
Clocel_4189
Transfer RNA biogenesis [BR:
ccb03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
Clocel_4189
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
Fer4_12
Mre11_2nd
Motif
Other DBs
NCBI-ProteinID:
ADL53850
UniProt:
D9SMJ4
LinkDB
All DBs
Position
complement(5054409..5055071)
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AA seq
220 aa
AA seq
DB search
MYKVVEKFVSINGEGLRAGELAVFIRFLGCNLKCSYCDTKWANEPECPYELMSGEEIYAY
IKETGVRNVTLTGGEPLIQKEMKELIDLLLKDGLLRIEIETNGSVDVQQINYSSERVSIT
LDYKGKSSLMEGYMKRDSFKLLTKKDSVKFVVGDNEDLERALSFIKECELLEKTNVLFSC
IFDKIQPAEVVEFMKNNKLIEARIQLQLHKYIWGPTVKGV
NT seq
663 nt
NT seq
+upstream
nt +downstream
nt
atgtataaggttgtagaaaagttcgtaagcataaatggtgaagggttaagagcaggagaa
ttggctgtttttataagatttttaggatgtaatctgaagtgttcctattgtgatactaaa
tgggctaatgagccagaatgtccttatgaattaatgagtggtgaagaaatttatgcctat
ataaaagaaactggtgtaagaaatgtaactttaacaggtggagaaccactaattcaaaaa
gagatgaaagaacttatagatcttctactaaaggatggacttcttcgaattgaaattgag
actaatggtagtgtagatgttcagcagattaattattcatcggaaagagtcagtataact
ttagactataaaggaaaatcttcactgatggaaggatatatgaagagagatagctttaag
ttattaacaaaaaaagattcagttaagtttgtagtgggtgacaatgaagatttagaaaga
gcgttatcttttataaaagaatgcgagctattagaaaaaacaaatgtattgtttagttgt
atattcgataaaatacagccagcagaagtagttgaatttatgaaaaacaataagttaata
gaagcaaggattcaacttcagcttcataaatatatttggggacctactgttaaaggtgta
taa
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