Cellulosimicrobium cellulans: CBR64_01560
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Entry
CBR64_01560 CDS
T04858
Name
(GenBank) DNA ligase (NAD(+)) LigA
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
cceu
Cellulosimicrobium cellulans
Pathway
cceu03030
DNA replication
cceu03410
Base excision repair
cceu03420
Nucleotide excision repair
cceu03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cceu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CBR64_01560
03410 Base excision repair
CBR64_01560
03420 Nucleotide excision repair
CBR64_01560
03430 Mismatch repair
CBR64_01560
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cceu03032
]
CBR64_01560
03400 DNA repair and recombination proteins [BR:
cceu03400
]
CBR64_01560
Enzymes [BR:
cceu01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
CBR64_01560
DNA replication proteins [BR:
cceu03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
CBR64_01560
DNA repair and recombination proteins [BR:
cceu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
CBR64_01560
NER (nucleotide excision repair)
GGR (global genome repair) factors
CBR64_01560
MMR (mismatch excision repair)
DNA ligase
CBR64_01560
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
CBR64_01560
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_ligase_aden
OB_DNA_ligase
Nlig-Ia
HHH_2
BRCT
DNA_ligase_ZBD
HHH_5
PTCB-BRCT
HHH
DUF8512
Zn_ribbon_TFIIB
Zn_ribbon_CLPX_N
Motif
Other DBs
NCBI-ProteinID:
ARU53560
LinkDB
All DBs
Position
complement(349141..351606)
Genome browser
AA seq
821 aa
AA seq
DB search
MSESTPATSAPTTPTATDEEVPTATSAAELDEAAAQRRWAELVAQVEADQRAYYEEDQPV
SSDAEYDARMHELQALEAAHPALQSPESPTQRVGGRAAAGFATVQHLEPMLSLDNAFSEE
DLAAWAARVHRDLGVAADAEVGYLCEVKIDGLAIALLYEKGRLVRAATRGDGRTGEDVTA
NVRTITSIPQQLAGDPATHPDVIEVRGEVFMGVADFAALNEKLVAAGQDPYANPRNTAAG
SLRQKDPAVTASRNLRMYAHGVGALQWEAGEHAELARQSDAYDLFERWGVPVSPHNRVVH
GLDEVMERIAYFGEHRHDIEHELDGIVVKVDELALQRRLGATSRAPRWAIAYKYPPEEVN
TRLLAIQVGVGRTGRATPYAVMEPVKVAGSTVRQATLHNQDVVRAKGVRIGDMVVLRKAG
DVIPEILGPVAALADDGYPREDFVMPAECPECGTPLRPMKEGDVDLRCPNAESCPAQVRG
RVEHIGSRGGLDVEALGEVTAAALTQPYEPAEPPLRTEKNLFGLTVEQLAPIKVVVRDPE
TGLPRPFEGVGESGEVAMSDGSVLLAKVVRPFQKVAARTYPPGFEDATPAERRAAGVRKD
YPVYGPSSTAQTLVDELRLAKTKDLWRILVSLNIRHVGPVAARALADWFGSLDAIEEAIR
DGGREALAAVEGVGPVIADEVIAWLEVGWHQEIVDQWKRDGVRFSIPGHPGPGARQAPTG
PLAGLTVVVTGSLEGFSRDGAKEAVIAAGGKSSGSVSKKTDYVVVGASAGSKETKARDLG
LPILDEDGFVALLAGGPDAVADRVGGDTSGADDEAGAGTDG
NT seq
2466 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgagagcacccccgcgacgtccgccccgaccaccccgaccgcgacggacgaggag
gtccccacggccacgtccgccgccgagctcgacgaggccgccgcgcagaggcgctgggcc
gagctcgtcgcgcaggtcgaggccgaccagcgcgcgtactacgaggaggaccagcccgtc
tcctcggacgccgagtacgacgcccggatgcacgagctccaggccctcgaggccgctcac
cccgcgctccagtcgcccgagtcgcccacccagcgcgtcggtggtcgcgccgccgcgggg
ttcgcgacggtgcagcacctcgagccgatgctgtcgctcgacaacgcgttcagcgaggag
gacctcgcggcgtgggcggcgcgcgtgcaccgtgacctcggcgtggccgccgacgcggag
gtgggctacctgtgcgaggtgaagatcgacggcctcgccatcgcgctgctctacgagaag
ggccggctcgtgcgggccgccacgcgcggggacgggcgcacgggcgaggacgtcacggcc
aacgtccgtaccatcacgagcatcccgcagcagctcgcgggcgacccggccacgcacccg
gacgtcatcgaggtccgcggcgaggtcttcatgggcgtcgcggacttcgccgcgctcaac
gagaagctcgtcgccgccgggcaggacccgtacgccaacccgcgcaacaccgcggccggg
tcgctgcgccagaaggacccggccgtcaccgcgagccgcaacctgcgcatgtacgcgcac
ggcgtcggagcgctccagtgggaggcaggcgagcacgccgagctcgcgcgccagtccgac
gcgtacgacctgttcgagcggtggggcgtgcccgtgtcgccgcacaaccgggtcgtgcac
gggctcgacgaggtgatggagcgcatcgcctacttcggcgagcaccgccacgacatcgag
cacgagctcgacgggatcgtcgtcaaggtcgacgagctcgcgctccagcgccggctcggg
gccacgagccgcgcgccccggtgggccatcgcgtacaagtacccgcccgaggaggtcaac
acgcgcctgctcgcgatccaggtcggcgtgggccgtaccggccgtgcgaccccgtacgcg
gtcatggagcccgtgaaggtcgccggcagcacggtgcgccaggcgaccctgcacaaccag
gacgtcgtgcgggccaagggcgtgcgcatcggcgacatggtcgtgctgcgcaaggccggg
gacgtcatcccggagatcctcggccccgtcgcggcgctcgcggacgacggctacccgcgc
gaggacttcgtcatgccggccgagtgccccgagtgcggcacaccgctgcgccccatgaag
gagggcgacgtcgacctgcgctgccccaacgccgagtcctgccccgcccaggtgcgcggc
cgcgtcgagcacatcggctcgcgcggcggcctcgacgtcgaggcgctcggcgaggtcacg
gccgccgcgctcacccagccgtacgagccggccgagccgccgctgcgcacggagaagaac
ctcttcgggctcaccgtcgagcagctcgcgccgatcaaggtcgtcgtgcgcgacccggag
accggcctgccccggccgttcgagggcgtgggggagtcgggcgaggtcgcgatgtccgac
ggctcggtgctgctcgccaaggtcgtccggccgttccagaaggtcgccgcgcgcacctac
ccgcccgggttcgaggacgcgacgcccgccgagcgccgcgcggcgggggtccgcaaggac
tacccggtgtacggcccgtcgagcacggcgcagaccctcgtcgacgagttgcggctcgcg
aagacgaaggacctctggcgcatcctcgtgagcctcaacatccggcacgtcggcccggtc
gcggcccgagcgctcgcggactggttcgggtccctggacgccatcgaggaggcgatccgt
gacgggggccgcgaggcgctcgcggcggtcgagggcgtcgggccggtgatcgcggacgag
gtgatcgcgtggctcgaggtcggttggcaccaggagatcgtcgaccagtggaagcgggac
ggggtgcggttctccatcccggggcatcccggtccgggcgcccggcaggcacccaccgga
ccgctcgcgggactcaccgtcgtcgtcacggggtcgctcgagggcttcagtcgcgacggc
gccaaggaggcggtgatcgccgcgggcggcaagtcgtcggggtcggtctcgaagaagacc
gactacgtcgtcgtcggagcgagcgcgggctcgaaggagaccaaggcccgcgacctcggc
ctgcccatcctcgacgaggacggcttcgtcgcgctgctcgccggcgggcccgacgccgtc
gcggaccgggtgggcggcgacacctccggcgcggacgacgaggcgggcgccggtacggac
ggctga
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