Corynebacterium casei: CCASEI_01995
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Entry
CCASEI_01995 CDS
T03041
Name
(GenBank) DNA topoisomerase I subunit omega
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
ccg
Corynebacterium casei
Brite
KEGG Orthology (KO) [BR:
ccg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ccg03032
]
CCASEI_01995
03400 DNA repair and recombination proteins [BR:
ccg03400
]
CCASEI_01995
Enzymes [BR:
ccg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
CCASEI_01995
DNA replication proteins [BR:
ccg03032
]
Prokaryotic type
DNA Topoisomerases
CCASEI_01995
DNA repair and recombination proteins [BR:
ccg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
CCASEI_01995
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Toprim_4
SBP_bac_3
Motif
Other DBs
NCBI-ProteinID:
AHI18984
LinkDB
All DBs
Position
394394..397369
Genome browser
AA seq
991 aa
AA seq
DB search
MAEPSGKTLVIVESGTKAKKIQPYLGDKYIVEASVGHIRDLPRGAADVPAKFKKEAWARL
GVNPEDDFTPLYVISPDKKKKVADLKAKLKECDQLYLATDPDREGEAIAWHLLEVLKPKV
PVRRMVFNEITKAAILEAAENTRELDEDLIDAQETRRILDRLYGYEVSPVLWKKVMPRLS
AGRVQSVATRVIVERERERMAFVSAEYWDLSADLAAQNADSANPAQFNARLSSVDGERVA
QGRDFGDDGKLTTNEVVVLDQKRAQSLADGLDKAAMHVASVEHKPYTRKPYAPFMTSTLQ
QEAGRRLHFTSERTMRIAQRLYENGHITYMRTDSTSLSQQGLTAARDAAVSNFGKEYAAS
SARRYDRKVKNSQEAHEAIRPAGETFATPGQLSGQLDTEEFKLYELIWKRTVASQMEDAK
GQSMKVTVAGQAATGENVEFSATGRTITFPGFLKAYEDQASAKNEDENRLPQLAEGDDLN
VAEVTVDGHSTNPPARYTEASLVKKMEDLGIGRPSTYASIIKTIQDRGYVLSRGNALVPS
WVAFAVVGLLESNFTELVDFDFTSSMEDELDAIASGNEDRTRWLNSFYFGDAEKGSEAGD
VKAASIARHGGLKSLVDVNLESIDARKVNSIKLYTDTEGRDVFVRVGRYGPYIERQIGVN
AEGEPEYQRANLSETTTPDELNEELAEKLFATPQGGRELGENPANGRTVVAKEGRFGPYV
TEVVREDERAKAEAEAEDVVAQERAAEDKQRKEDGMRAKNWETKTAAKQKEKRIAEYIDE
KLKPGTASLFSSMEPSKVTLDDALKLLSLPREVGVDTADNEMITAQNGRYGPYLKKGSDS
RSLANEEQIFSITLDEARRIYAEPKRRGRQAAQPPLKQLGDNDVSGKPMSVKDGRFGPYV
TDGTTNASLRKGDSPETLTDQRANELLSERRAKQDADGGAAKKTTKKATKSSAKKTTKKS
TKSTAKKSTKRATKKPSPATKNVVKAGSRRK
NT seq
2976 nt
NT seq
+upstream
nt +downstream
nt
gtggcagagccatcaggcaagacactggtcatcgtggagtcaggtaccaaggcgaagaag
attcagccgtacctgggtgacaaatacatagttgaggcctcagtgggccatattcgcgac
ttgcctcgtggtgctgctgacgttcctgcgaagttcaagaaggaagcatgggcgcgcctg
ggcgtgaacccagaagatgacttcactccgctttatgtcattagcccggataagaaaaag
aaggtcgcggacctcaaagctaagctcaaagagtgcgaccagctttatctggcaacagac
ccggaccgcgaaggtgaagccatcgcgtggcacttgctggaggtcttgaagcccaaggtt
ccggttcgccgaatggtgttcaatgagatcaccaaagccgctattttggaagcggcggag
aatacccgtgagctggatgaggacctgattgatgcgcaggaaacccgccgcatattggac
cgtctgtacggctatgaggtctccccggtgctgtggaagaaggtcatgccacgtctgtcc
gcaggccgtgttcagtcggttgccacccgcgtgatcgttgagcgtgagcgtgaacgcatg
gcgttcgtgtctgcggagtactgggatctttcagctgatttggctgcccagaacgcggac
tcggcgaatccggcgcagttcaatgcgcgtctgagcagcgttgatggtgagcgcgtggcg
cagggccgtgactttggtgatgacggcaagctcaccaccaatgaagtggtggtgctggat
caaaagagagcacagtcgcttgccgatggcctcgataaagccgccatgcacgtcgcttct
gtggaacacaagccttatacccgtaagccttatgcaccgtttatgacgtcgactctgcag
caggaggcgggccgtcgcctgcactttacttctgagcgcaccatgcgtattgcgcagcgt
ttgtacgaaaacggtcacattacctatatgcgtactgactccacgtcgctgtctcagcag
ggtttgaccgctgcgcgtgatgctgcggtgtcgaacttcggcaaggagtatgcggcttct
agcgcgcgtcgttatgaccgcaaggtcaaaaactcgcaggaagcgcacgaggcaattcgt
cctgccggcgaaactttcgccaccccaggtcagctgtctggtcagctggatactgaggag
tttaagctctacgagctgatctggaagcgcaccgtcgcctcccagatggaggacgccaag
ggccagtccatgaaggtcaccgtcgcaggtcaggccgcaaccggggagaacgtggagttc
tccgctaccggccgtactattaccttccctggcttcctcaaagcttatgaggaccaggca
tcggcgaagaatgaggatgaaaaccgtctgccacagctggcagaaggcgatgacctcaac
gtcgcagaagttaccgtcgatggtcactccaccaacccgccggcacgatataccgaggcc
agcttggtgaagaagatggaagatctcggcatcggccgtccttccacctatgcatccatt
atcaagaccatccaggaccgcggctacgtgctctcgcgtggcaacgcgctggtcccaagc
tgggttgctttcgccgttgttggtctgttggagtccaacttcacggagctggtggacttt
gacttcacttcctcgatggaagatgagctggatgctatcgcgtccggcaatgaggaccgc
acgcgctggctcaacagcttctacttcggtgatgccgaaaagggcagtgaggcaggagac
gtcaaggcagcttccatcgctaggcacggcgggcttaaatcacttgtcgatgtcaaccta
gaaagcattgacgcccgcaaggtcaactccatcaagctgtacacggataccgagggccgt
gacgtcttcgtacgcgtgggccgctatggtccatacatcgagcgtcagatcggtgtgaac
gctgaaggcgagccggaataccaacgcgcaaatctgtctgagaccaccactccggatgag
ctcaatgaggaactggcagaaaagctctttgctaccccgcagggtggacgtgagttgggt
gagaacccagccaatggccgcaccgtggtggctaaggaaggccgtttcggtccttatgtc
accgaggttgtgcgcgaagatgagcgcgccaaggcagaagccgaggccgaggacgttgtg
gcgcaggaacgtgctgcggaagataagcagcgcaaagaagatggcatgcgcgcgaagaat
tgggaaaccaagacagctgcgaagcaaaaagaaaagcgtatcgccgagtacatcgatgaa
aaactcaagccgggcactgcctcgctgtttagctccatggagccatccaaggtcactctt
gatgacgcgttgaagctgctgtctttgccacgcgaggttggcgttgataccgcggataat
gaaatgattaccgcgcagaacggccgctatggtccgtacctgaagaagggctcggattcg
cgttctttggcaaatgaagagcagatcttctccatcaccttggatgaggcacgccgcatc
tatgctgagccgaagcgtcgtggacgtcaggctgcgcagccgccgctaaagcagctgggc
gataatgacgtttccggcaagccaatgtcggtcaaggatggccgcttcggcccttatgtc
accgatggcaccacgaatgcttcgctgcgcaagggcgactccccggaaaccttgacggac
cagcgcgcgaacgagctgctgtctgagcgtcgcgccaagcaggacgctgacggtggtgcc
gcgaagaagaccactaagaaggccacgaagtcttcggctaaaaagaccactaagaagtct
acaaagtcgacggccaagaagtcgaccaagcgcgctactaagaagccttcaccagcaacg
aagaacgtggtcaaggcaggctctcgccggaagtaa
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