Corynebacterium casei: CCASEI_04010
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Entry
CCASEI_04010 CDS
T03041
Name
(GenBank) hypothetical protein
KO
K02529
LacI family transcriptional regulator, galactose operon repressor
Organism
ccg
Corynebacterium casei
Brite
KEGG Orthology (KO) [BR:
ccg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccg03000
]
CCASEI_04010
Transcription factors [BR:
ccg03000
]
Prokaryotic type
Helix-turn-helix
LacI family
CCASEI_04010
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_1
Peripla_BP_3
LacI
Peripla_BP_4
HTH_38
TetR_N
HTH_24
HTH_23
HTH_7
HTH_IclR
Sigma54_DBD
HTH_Tnp_ISL3
HTH_36
Sigma70_r4_2
MarR_2
HTH_Crp_2
HTH_AsnC-type
HTH_28
Motif
Other DBs
NCBI-ProteinID:
AHI19380
LinkDB
All DBs
Position
complement(824000..824992)
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AA seq
330 aa
AA seq
DB search
MVTAPTTLRDIARACNVSVSTVSRALADNPAIAKKTRQLIQETAKELNYRPNAQARALKS
SRTDAIGVVVPSLVNPFFAAMAAAIEDEANQAGYATIITSSGESSPKITEAIEALRARQV
DGIIAVPHIEAAEMLEDVALSIPLLFIDRHLEGSNIPAVISDAAPGIKAALEALNSRGHH
KVGYLAGPQTTSTGRDRLQDFRRYAEELGMDQIVHHGGYLHEEGFRGTQKLLEQQPTAII
AGDSMMTFGALEACYRENVDIGKQLALIGFDDFVFMRIQPAPVAIIDQSVEHMGRTALRN
LVQSFSAKSPPEGAVVKTRFIPRESIEFTP
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atggtgactgctccgaccacgctgcgagacatcgcacgcgcctgcaacgtttctgtttcc
acggtctcacgcgcgctggcggacaacccggccattgcaaaaaagacccgccagctcatc
caagaaaccgctaaagagctcaactaccgccccaatgcacaggcacgagcattgaagagc
tcgcgcactgacgccatcggagttgtggttcccagcctggtcaacccattctttgcggcg
atggctgccgctatcgaggatgaggctaatcaggcgggttatgccaccatcatcaccagc
agtggtgaaagctccccaaagatcaccgaggccatcgaagcgctccgcgcacgccaagtt
gatggcatcatcgccgttccccacatcgaggcagcggagatgctcgaggacgtcgcactt
tcaattcccctgctgtttattgaccgccacctcgagggcagcaacatccccgcggtcatc
tcagatgcggcaccgggcatcaaggcagcgcttgaggctttaaattcccgcggtcaccac
aaggtcggctacttggccggaccacaaaccacctccacaggccgtgatcgcctacaggac
ttccgccgctatgcagaagagcttggcatggaccagatcgttcaccacggcggatacctg
catgaagaaggcttccgcggcacgcagaagctactggaacaacagcccaccgcgattatc
gccggtgactccatgatgacctttggtgcgctggaggcatgctatcgggaaaacgtggac
atcggcaagcaacttgctctcatcggctttgatgacttcgtcttcatgcgcatccaaccc
gctcccgtggcaattattgaccaaagcgtggagcacatggggcgaaccgcgctgcgtaac
ctagtgcagtcattcagcgccaagtctcccccggaaggtgccgtggttaagacccgtttt
atccctcgcgaatccatcgaatttacgccctaa
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