Corynebacterium casei: CCASEI_05700
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Entry
CCASEI_05700 CDS
T03041
Name
(GenBank) hypothetical protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
ccg
Corynebacterium casei
Pathway
ccg03030
DNA replication
ccg03430
Mismatch repair
ccg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ccg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CCASEI_05700
03430 Mismatch repair
CCASEI_05700
03440 Homologous recombination
CCASEI_05700
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ccg03032
]
CCASEI_05700
03400 DNA repair and recombination proteins [BR:
ccg03400
]
CCASEI_05700
Enzymes [BR:
ccg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CCASEI_05700
DNA replication proteins [BR:
ccg03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CCASEI_05700
DNA repair and recombination proteins [BR:
ccg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CCASEI_05700
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
PTCB-BRCT
BRCT
Motif
Other DBs
NCBI-ProteinID:
AHI19716
UniProt:
A0ABN4CE91
LinkDB
All DBs
Position
complement(1228348..1229799)
Genome browser
AA seq
483 aa
AA seq
DB search
MTVSALGASLSISQGNLVYVPSQLTASLNSEERRDIALDEIKSVNAMQPSATSNGEIVIS
FTGKAADALTIVFAPNQDAEACARWINDVRSGKASTSSAPAGADSERVLAATATPGLDFV
AVDVETANGNWGSICQIGAVRFVAGEETESKVWLCKPPAGIEHFDDINISIHGITADDVK
DAQTFAEAASELLTFMRDDVLVAHNAQFDSTALRSAFLRSQMPVPEMKLACSLALARHAS
KSKVLAVANHKLPTVAKAVSFGEFKHHDALDDARAAGHIISALAPAFDSPVEGEQSIRDV
FDAQGFQLGTMTPEHIMPVLRKDTAPISPEDLGAGTDFRDRTSSDPWSSSESPATSEKKS
AGAGEKKAQRRPAPWESVATPDTIPDPNPDADKDSPLYGQHVTLTGDFEPFDKGVLWNGI
AHHGGQIGKNVTKKTTVLVLGEWATTTSKEKRADELNEKGQSIEKWPASKLFEVLELETE
PPF
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
gtgacggtttcagcactcggagcctctttgtccatatcgcagggcaacttggtctatgtt
ccatcgcagcttacggcctcgctcaacagcgaagaacgccgcgacatcgctcttgatgag
atcaagagcgttaatgccatgcagccaagcgcaacctctaacggtgagattgtcatttct
ttcacaggcaaggctgccgatgccttgacgatcgtgttcgcgccgaaccaggacgcggag
gcctgcgcgcgctggattaatgatgtgcgctctggcaaggcatcgacaagctctgcacct
gctggcgccgatagcgaacgcgttttggctgctactgctacccctggcttggactttgtc
gccgtcgacgtggaaaccgccaatggcaactggggctctatctgccagattggtgccgtg
cgttttgtagccggtgaggaaaccgaatccaaggtctggctgtgcaagccaccagcgggc
attgagcactttgatgacatcaatatctccatccacggcatcaccgccgacgacgtcaaa
gacgcccagactttcgcggaagcagcctctgagctgttgacgtttatgcgtgatgatgtg
ttggtcgcgcacaatgcacagtttgattccactgcgcttcgctcagctttccttcgctcc
cagatgccggttccagaaatgaagctggcgtgttctttggcattggctcgccatgcttcc
aagtccaaggttctcgcagttgctaaccacaagctcccaaccgtagcgaaggccgtgagc
tttggtgaattcaagcaccacgatgccttggatgatgcccgcgcggctggccacatcatt
tcggctttggcaccggcgtttgactcccctgtggaaggtgagcaaagcatccgcgacgta
tttgatgcacagggattccaactgggcaccatgaccccggagcacatcatgccggtgctg
cgcaaagacaccgcgccaatttctccggaagatttgggcgcaggaaccgacttccgcgac
cgcacatcctcggacccttggagttcttctgaatctcccgccacgtctgagaaaaagtct
gcaggtgccggtgagaagaaggcccagcgccgtccagcaccttgggagtcggtggcaacg
ccggatactatccccgatccgaacccggacgcggacaaggattccccactctatggccaa
catgtcacgttgaccggtgacttcgagccctttgacaagggcgtgttgtggaacggtatc
gcgcaccacggcggtcagattggcaagaacgtgacgaagaagaccaccgttttggtcctc
ggtgagtgggccaccaccacgtcgaaggaaaagcgagcggacgagctcaatgagaagggc
cagagcattgaaaaatggccggcttccaagctctttgaggtccttgagctagaaactgaa
cctccgttctag
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