Corynebacterium casei: CCASEI_06210
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Entry
CCASEI_06210 CDS
T03041
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
ccg
Corynebacterium casei
Brite
KEGG Orthology (KO) [BR:
ccg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ccg03016
]
CCASEI_06210 (truB)
Enzymes [BR:
ccg01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
CCASEI_06210 (truB)
Transfer RNA biogenesis [BR:
ccg03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
CCASEI_06210 (truB)
Prokaryotic type
CCASEI_06210 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
AHI19818
LinkDB
All DBs
Position
complement(1339479..1340318)
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AA seq
279 aa
AA seq
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MDKPAGMTSHDVVARIRREFGTRKVGHAGTLDPMATGVLILGIERGTKFLAHMVAATKAY
DATIRLGASTTTDDFEGEVINQTSAEHITDEQALAEIKKLTGDIMQKPAKVSAIKIDGKR
AYQRVRDGEEVDIPARPVTVSRFDVNASRTEPREFDVTVECSSGTYIRSLARDLGDSLGV
GGHLTALRRTAVGPFLLADASPIDNLQLSLTLDEALVRCYPRLDVTEEEAAKLAMGQWLE
PRGLKGTHAAVGPDGRSVALIKEQGRRLATVFVAHPSTL
NT seq
840 nt
NT seq
+upstream
nt +downstream
nt
gtggataaaccggccggcatgacttctcatgacgttgtcgcccgcatacgaagggagttt
ggcacccgcaaagtcggccacgccggcaccctagatcccatggccacgggtgttttgatc
ctgggtattgaacgcggcactaagtttttggcgcacatggttgcagccaccaaagcctat
gacgccaccattcgtttgggtgcttccaccaccaccgatgactttgagggagaagtcatt
aaccagacctctgctgagcacatcactgatgagcaagctttggcagaaattaagaagtta
accggcgatatcatgcaaaagccagcgaaggtcagcgccattaaaattgacggcaaacgc
gcctaccagcgtgtacgtgacggcgaggaggttgatatccctgcccgtccggtgacagtt
agccgcttcgatgtcaatgccagccgtaccgaaccacgcgagtttgatgtcaccgttgag
tgttcatcgggtacctatattcgctcgttggctcgtgatttaggcgatagcctgggtgtg
ggtgggcatctcaccgccctgcggcgcacggcggttgggccatttttgcttgccgatgcc
tccccgatcgacaacctacagctctccctcactctcgatgaggcacttgtgcgttgctac
ccacgcctcgatgtcaccgaagaagaagcagccaagcttgccatgggccaatggttagag
ccacgtgggctcaaaggaactcacgctgccgttggaccggatggccgctccgttgcattg
atcaaagaacagggcaggcgtctagcaaccgtcttcgtcgcgcatccttcgactctctag
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