Corynebacterium casei: CCASEI_06650
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Entry
CCASEI_06650 CDS
T03041
Name
(GenBank) ribonuclease D protein
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
ccg
Corynebacterium casei
Brite
KEGG Orthology (KO) [BR:
ccg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ccg03016
]
CCASEI_06650
Enzymes [BR:
ccg01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
CCASEI_06650
Transfer RNA biogenesis [BR:
ccg03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
CCASEI_06650
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
DNA_pol_A_exoN
HRDC
Motif
Other DBs
NCBI-ProteinID:
AHI19902
LinkDB
All DBs
Position
complement(1432310..1433545)
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AA seq
411 aa
AA seq
DB search
MNSPRRVPEGGIPTVFSTRNGVIEAARILAQGSGPIAIDTERASSFRYDDRAFLIQLRRP
DTPIVLIAPEGIRSDVREFLAPVINGEEWIVHAAATDLTCLAWLGLYPGKLFDTEVAGRL
LGIPNPNLAYVTEEFLGIELDKGYGATDWSRFPLSKAQLAYAALDVETLIDLAEEMAYDL
EQDDKAEWARQEFAAIANHFGSITEPAPRSWIDSRGIRGIYELEGLAVAKAVWEEREQQA
YDADIAPGQIISNSSLVDIARHIPRSINQLRRISQLRNRSAAELKKWVTIITTAADSDPK
TWPEIPVENHEYPTKQFLKNNHPDLNELVNVLREDRDDLGEDIAVVPDSIVSVAVLRSAV
WATRGDIRSPQYGEKAQTVTTTVQLEEFLREHGLRNWQVEQLTPVLESALL
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atgaattctccgcgccgcgtccctgaaggtggaatccctaccgtattttcaacacgcaac
ggagtaattgaagcagcacgaatcctggcacaaggctccggtccaatcgctatcgatact
gaacgtgcgtcgtcgtttcgatatgatgaccgggcctttcttattcagctacgccgccca
gatacccccatcgttcttattgctccagaaggtattcgcagcgatgtccgtgagttcctc
gcgccggttatcaacggcgaagaatggattgtccatgctgcggctactgatctcacgtgt
ttagcctggttaggtttatatccgggaaagctctttgacacagaagtggcgggacgcctc
ctgggtatccctaatccaaatttggcctatgttactgaagaattcctcgggattgagctt
gataagggttatggggcgacggactggtcgcgctttccgttgtctaaggcacaacttgct
tatgcggctttagatgtggaaaccctgattgaccttgctgaagagatggcctatgacctt
gagcaagacgacaaggccgaatgggctaggcaagaattcgcggctattgctaaccacttc
ggaagtatcaccgagccggccccacggtcatggatagattcccgcgggattcgcggaatc
tatgaacttgagggtttagcggttgccaaagctgtatgggaagaacgcgagcagcaggct
tacgatgccgacattgctcctggccaaattatttcgaactcgtctcttgttgatattgca
cggcatatcccgcgttccataaaccaacttcgacggatttctcagttgcgaaaccgatct
gcggcggagcttaaaaagtgggtcaccattatcacgacagctgccgactcagatccgaaa
acctggccagaaattcctgtggagaatcatgagtaccctactaagcagttcttaaaaaac
aaccaccctgatctcaatgagttggtcaatgtcctgcgcgaagaccgcgatgacctcggc
gaggacatagccgtggtgcctgattccattgtcagcgtcgccgttttgcgcagtgctgtc
tgggcgacccgcggagatattcgaagccctcaatacggcgagaaagctcaaactgtcacc
accacggttcagctcgaggaattcttgcgtgaacacggtctgcgcaattggcaggtcgag
cagctcaccccagttcttgaatcagctctgctctaa
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