Corynebacterium casei: CCASEI_07190
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Entry
CCASEI_07190 CDS
T03041
Name
(GenBank) helicase
KO
K03727
ATP-dependent RNA helicase HelY [EC:
5.6.2.6
]
Organism
ccg
Corynebacterium casei
Brite
KEGG Orthology (KO) [BR:
ccg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccg03019
]
CCASEI_07190
Enzymes [BR:
ccg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
CCASEI_07190
Messenger RNA biogenesis [BR:
ccg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
CCASEI_07190
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DSHCT
SH3_HelY
DEAD
ResIII
DEXQc_Suv3
Helicase_C
AAA_22
MTR4-like_stalk
IstB_IS21
Motif
Other DBs
NCBI-ProteinID:
AHI20009
UniProt:
A0ABN4CH41
LinkDB
All DBs
Position
complement(1553402..1556203)
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AA seq
933 aa
AA seq
DB search
MSHPLDDFQVAGCEAVEEGHGVLVCAPTGAGKTIVGEFAVSLALSQGTKCFYTTPIKALS
NQKYHDLVAEHGERAVGLLTGDVSINGNAEIVVMTTEVLRNMIYADSTALHRLTHVVMDE
IHFLADASRGAVWEEVILNLDESVSIIGLSATVSNSEEFGDWLSTVRGDTRIIVSEHRPV
PLDQWMLLGRKIFPMFEPGSGGQVNSELARRIARLESGSSEEGRDDYKAGKGFRARARQQ
GRDGRDGRDDKDGRGHGHGGRSGAPRPQDRYRPLGRPEVLQILQGQNMLPAITFIFSRAG
CEGALYQCLRSRMSLTTPEEAEEIKAIVDAGVEGIPEEDLQVLNFRQWRQALSRGFAAHH
AGMLPAFRHIVEDLFVKGLVRAVFATETLALGINMPARTIVLEKLIKFNGEAHVDLTPGQ
YTQLTGRAGRRGIDTIGNAVVMWAPAMDPRQVAGLASTRTYPLISTFEPGYNMAINLLGM
LGYQESLRLLEKSFAQFQADGSVVEETREIERAEHRVRDLRAQLNQLIEMLAPPAPDDDD
AADMLLDYIDLRRELTEEERKSVESKTHERSKEVVKILGKLQIGDVIALAGKKHPTLAVV
ATPANQTTDPRPWITTETGWSGRIDASGIENPPIVIGHMKLPRSVQKSPRRNAKFVQDQF
RRQHFDRPKRMKMKPRSRPNPQVGVLRDAIRLHPVHEWPATDREQLAGLAQKLARRERDL
KRLTNTVERATDTLGKTFERIVDLLAQMDYVEFEGLGEDRTPVITDEGQRLALIHNECDL
LVAQCLKRGVWDDLDPAELAGVVSMCSFENRKETSGSPEAATDRMAEAMNATLRIYTELT
ADEQLHKLPLTRQPEPGFSLALHQWAAGAPLGYCMSAAAESGADLTPGDFVRHCRQAVDL
LQQVAKTAYTDELKANARRAVDAIQRGVVAIGA
NT seq
2802 nt
NT seq
+upstream
nt +downstream
nt
ttgtcacatcccctggatgacttccaggttgcgggctgcgaggctgtagaagaaggccac
ggcgtccttgtctgcgcaccaaccggtgcaggtaagaccatcgtcggcgagtttgctgtg
tccctcgcgctctcacaaggcacaaagtgcttttacaccacaccgattaaggcactaagc
aaccagaagtaccatgaccttgttgccgagcacggtgagcgggcagttgggcttttgacc
ggtgacgtttccatcaacggcaacgcagaaatcgtcgtgatgaccactgaagtcctgcgc
aacatgatttacgcagactcgactgcgctgcatcgactaacccacgtggtgatggatgag
atccacttccttgcagatgcttctcgtggtgctgtgtgggaagaggtcatcctcaacctg
gatgaatcggtttcgattattggcttgtcagcaaccgtgtccaactcggaggaattcggt
gactggttgtccacggttcgtggagataccaggatcattgtttcagaacaccgcccggtc
ccattggatcagtggatgctgcttggccgcaagattttcccgatgtttgaaccgggctcc
ggtggccaggtcaattctgaattggcgcgacgtatcgcgcgtttggaatcgggttccagt
gaagaaggtcgcgatgactacaaggcgggcaaaggctttcgtgctcgtgctcgtcagcag
ggaagagacggtcgcgacggccgtgatgacaaagatggtcgaggacacggccatggcggt
cgctcaggcgcgccacgcccgcaggatcggtaccgcccactaggtcgtccggaggttttg
cagattctgcagggacaaaacatgctcccggcaattacctttatcttctcccgtgccggt
tgtgaaggcgcgctgtaccaatgcctgcgttcgcgtatgtcgttgaccacgcctgaagaa
gccgaggaaatcaaggcaatcgttgatgccggcgtagaaggaatcccggaagaagacttg
caggttcttaactttcggcaatggcgccaagcgctgtcacgcggattcgcagcacaccac
gcgggcatgctgccggcgtttcgccacattgtggaagacctctttgtcaagggcttagtt
cgtgcagtattcgccactgagactttggcgctaggaatcaacatgccggcgcgcaccatc
gtgctggaaaaactcatcaagttcaacggcgaagctcatgtagacctcacgccgggacag
tacacacagctcaccggccgcgcaggccgtcgtggcatcgacaccattggtaatgcagtg
gtcatgtgggcgccagcgatggacccacgtcaagttgcaggccttgcttcaacgcgtacc
tatcctttgatttcaaccttcgagccgggctacaacatggccatcaacttgctcggcatg
ctgggctaccaagaatcgttgcgtttgctggagaagtctttcgcgcagttccaggccgat
ggctccgtcgtggaagagacgcgcgagatcgagcgtgcagaacaccgcgtgagggatttg
cgtgcgcaattgaatcagctcattgagatgcttgcaccgccggcaccggacgatgatgac
gctgcggatatgctgctcgactacatcgatctgcgccgcgaactgactgaagaagagcgt
aagtccgtcgagtcaaagacacatgagcgctccaaggaagtagtcaagattttgggcaag
ctgcaaatcggtgatgttattgcactggcggggaagaagcacccaaccctggcggttgtg
gctaccccggctaatcaaaccaccgatcctcgtccgtggattactacggagaccggttgg
tccgggcgtattgatgccagtggcattgagaacccaccgattgtcattgggcacatgaag
ctcccgcgttcggtgcaaaagagtccgcgccgcaatgccaagttcgtgcaggaccaattc
cgccgtcagcactttgaccgcccaaagcgcatgaagatgaagccccgttcacgccccaac
ccgcaggttggggtcctgcgtgacgctatccgcctgcatcctgtccacgaatggccggcg
acagaccgtgagcaacttgctggtctggctcagaagctggcacgccgcgagcgggatttg
aagcgtctgaccaacacggttgagcgcgcaactgatactttgggcaagacttttgagcgc
attgtcgacttgttggcgcagatggactacgtcgagtttgagggcttgggcgaagatcgc
actccggtcattactgatgaaggccagcgcttggccttgattcacaatgagtgcgacctt
ctggtggcccagtgcctcaaacgcggtgtgtgggatgacctggatccggctgaactggca
ggcgttgtttccatgtgttcgtttgagaaccgcaaggagacctcaggctcaccagaagcg
gcgacagatcgcatggctgaggctatgaacgccaccctgcgcatctacactgagctgacc
gcagatgagcagctgcacaaattgccgctcacacgccagccagagccaggattctcactg
gcccttcatcagtgggcagcgggcgcaccgctgggctactgcatgtccgcagccgctgaa
tccggtgcggatctaacacctggtgactttgttcgccattgccgtcaggcagttgacttg
ctgcagcaggtggcaaagaccgcttataccgatgagctcaaagccaatgcccggcgcgcg
gtggatgccatccagcgcggtgtggttgctatcggagcttaa
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