Corynebacterium casei: CCASEI_08845
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Entry
CCASEI_08845 CDS
T03041
Name
(GenBank) DNA/RNA helicase
Organism
ccg
Corynebacterium casei
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
DUF3670
Helicase_C
DEAD
ERCC3_RAD25_C
HTH_Cmi2_C
Motif
Other DBs
NCBI-ProteinID:
AHI20332
LinkDB
All DBs
Position
complement(1928694..1931804)
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AA seq
1036 aa
AA seq
DB search
MASYLIHGLWLPVSGLSLWIEQVDGHKIVTPQAVPEGTFPPGIGKMLEKKSFRTRSRVYL
RTPKGKNVELMAPMARFGPADAVVALSQLAYLDDEEQRGVIPAEQRAAIAPDLQWIIRAY
RGLTRFARAGRVTIRLSYQAGEWYPMWQLANGLGERGWLAEMVAAAPGILTINNRSLSED
MADDLTHWIVYTQLADLTSHPRPYPWHDFAKALLQTTPIARGRAQLLRGLNEWKDSITAV
DLGVVFIVEEPFETESEVDDSPSAPKTSESALWPVRVCVRSGADSPRPIHEGRLDRSSLE
KLKESRRRAISISPRVDPQASKTPNYFDEGAGDWDVYLDTSALVEFVSDDASALKAAGYT
VMLPKAWTQMAASAKLVTKELSGDSPLQKKLGMDQLVEYDWKLSVGDMELSDEEMQQLVN
SKTGLIRLRGEWVMADRTALGKITEYMDQLASNSKTRMRKELDALAREAERMRMLEEPGW
QDKVAEVERKLEEFNLQLKEEDADFGVATMAELRELALEAMAKEPIEFAGSQWHSSMLGG
METPAPTRVKIPDSVHAELRDYQHRGVDWLYWMSRNNVGAVLADDMGLGKTLQLLTLLAV
EKDRGESTGPTLVVAPTSVVGNWVREAHKFVPDLKVMVHHGSTRAKDQELLTSAAEHDLV
VTSYGTISRDFKVLGMVAWDRVVLDEAQAIKNSSTRSSKAVRSLPSRHRIALTGTPVENR
LSEMRSILDFCNPGVLGSASFFRNHFASAIEKYQDEDMTDRLRQLTAPFIMRRLKTDSAI
IDDLPEKSEEILTVTMTSEQAALYTALVEDIQLRMQNAPKGMALRGLVLSSLTRIKQICN
HPSHYLGDGSPVTSKGRHRSGKVEKLMEILDSAVTHDERVLIFTQYKAFGDILQPYLTAQ
LGAKIPFLHGGVPKNRRDDMVTEFQAADGPPAMILSLKAGGTGLNLTAANVVVHMDRWWN
PAVENQATDRAFRIGQSKNVQVYKMITAGTLEESIQDILDGKTQLAGAVVGEGEGWITEL
NPEQLAQLMSYRERES
NT seq
3111 nt
NT seq
+upstream
nt +downstream
nt
atggcttcttaccttattcacggactctggctgcccgtttcaggcttgagtttgtggatt
gagcaggtagatgggcacaagattgttactccacaagcagtgccagaggggactttcccg
ccaggcattggcaagatgttggagaagaagtctttccgcactcgctcgcgtgtgtatttg
cgtacgccgaagggcaagaacgttgagttgatggctccgatggcacgctttgggcctgcc
gatgccgtcgtggcgctatctcaattggcgtatctagatgacgaagaacaacgcggagtc
attcccgcagagcagcgcgcggccatcgccccggacctgcagtggattattcgcgcttac
cgcggactgacccgcttcgcgcgggcaggacgtgtgaccatccgcctgagctatcaggcc
ggcgagtggtatccaatgtggcagctggctaatggtctgggggagcgcggctggctggca
gagatggtggcggctgcaccggggattttgactatcaataaccgttccttgtcagaggac
atggcggatgatttaacgcactggattgtctacacgcagttggcagatctgaccagccat
ccgcgtccttatccatggcacgattttgccaaggcgttgctgcagaccactccaatcgcg
cgtggtcgcgcgcagctgctgcgcgggcttaatgagtggaaagattccatcactgcagtc
gatctgggtgtggtgttcattgttgaagaaccgtttgagacagagtctgaagtagatgac
tcaccgtccgcaccgaagacatcggaaagcgcgttgtggccagtgcgcgtgtgcgttcgc
tcgggtgcagattccccgcggccaattcatgagggtcgcttggaccgcagtagcttggaa
aagctgaaagaatcgcgtcgtcgtgcgataagtattagcccgcgggtggatccgcaggct
tcgaagaccccgaactatttcgatgaaggtgccggcgactgggacgtctacctggacact
tcagcattggtggagtttgtcagtgacgatgcatcggcactgaaagcagcaggctatacg
gtcatgttgccaaaggcgtggacacagatggcggcctcagccaagttggtaaccaaggaa
cttagcggggattcgccgctgcagaagaagcttggcatggaccagctggtcgaatatgac
tggaagctctcggttggcgatatggagttgtcggatgaagagatgcaacagctggtcaac
tccaagaccggactgattcgtctgcgcggcgagtgggtcatggcggaccgcaccgcgctg
ggcaaaatcaccgagtacatggaccagctggcgtccaattccaagacgcgcatgcgcaag
gagctggacgctttggcccgcgaggccgaacgcatgcgcatgctggaagaaccaggttgg
caggacaaggttgccgaggttgagcgcaagctcgaagagtttaacctgcagctgaaggaa
gaagacgcggacttcggcgtggccacaatggctgagctacgagagctcgcgctggaagct
atggctaaggagccgattgagtttgcgggctcgcagtggcattcctccatgttgggtggc
atggaaacgccagcgccgacgcgcgtgaaaatcccagattccgtgcatgcggagttgcgt
gattatcagcatcgcggcgtggattggttgtattggatgtcgcgcaacaacgtgggcgca
gtgcttgccgatgacatgggcctgggcaaaaccctgcagcttcttactttgctcgcggtc
gaaaaagaccgaggagaatccaccgggccgacattggttgtggcaccaacttcggtggtg
ggaaactgggtgcgtgaggcgcacaagttcgtgccggatttaaaggttatggtccaccac
ggctcaactcgtgcgaaagaccaggaacttctgacttctgccgccgagcatgatttggta
gtgaccagctatggaaccatcagccgtgacttcaaagtccttggcatggtggcatgggat
cgcgtggtgctggatgaggcgcaggcgattaagaactcttcgactcgttcatcgaaagca
gtgcgaagtctgccttcgcggcatcgaatagcgctgactggtacgccagtggaaaaccgc
ctgtccgaaatgcgttccatcttggacttctgtaatcctggtgtgctgggatcagcgtcg
tttttccgcaaccattttgcttccgccattgagaagtaccaagacgaggacatgaccgat
cgtctgcgtcagctgacagcgccgtttatcatgcgcaggctcaagactgactcggcgatc
attgatgacttgccggagaagtcagaagagattttgacggtcaccatgacctctgagcag
gccgcgttgtacacggcgttggtggaggacatccagctgcgcatgcaaaacgcgccgaag
ggcatggcgctgcgcggactggtgttgtcctcgctgacgcgcatcaagcagatttgtaac
cacccttcgcactacttgggtgatggttctccggtgacgtccaagggccggcaccgttcg
ggcaaggtggaaaagctgatggagattttggactctgcggttacccacgatgaacgagtt
ctgattttcacgcagtacaaggcttttggcgatattttgcagccttatctgactgctcag
ttgggcgcgaagattcctttcttgcacggtggtgtgccaaagaatcgacgagatgacatg
gtcacggagtttcaggctgccgatggcccaccggcgatgatcctgtcgctgaaagccggc
ggtactggtttgaacctgaccgcggcaaacgtggtagtccatatggaccgctggtggaac
cccgcggtggaaaaccaggcgacggaccgcgctttccgcatcggccagagcaagaacgtg
caggtgtacaagatgattactgccggtacgctggaagaatccattcaggatattctagac
ggcaagacacaacttgctggtgccgtggttggggaaggcgaaggctggatcacggagctg
aatccggagcagctggcgcaattgatgagttatcgagagagggagagttag
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