Corynebacterium casei: CCASEI_10130
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Entry
CCASEI_10130 CDS
T03041
Name
(GenBank) ATP-dependent DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ccg
Corynebacterium casei
Pathway
ccg03420
Nucleotide excision repair
ccg03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ccg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CCASEI_10130
03430 Mismatch repair
CCASEI_10130
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ccg03400
]
CCASEI_10130
Enzymes [BR:
ccg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CCASEI_10130
DNA repair and recombination proteins [BR:
ccg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CCASEI_10130
MMR (mismatch excision repair)
Other MMR factors
CCASEI_10130
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
ResIII
Motif
Other DBs
NCBI-ProteinID:
AHI20581
LinkDB
All DBs
Position
complement(2193913..2196663)
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AA seq
916 aa
AA seq
DB search
MRSESNNQSQNEQQFPDDFDQLPLPPLEPEPEFAPPEDIDQPPEDVLDLFRDSAVSSEEA
QAKRNPFAPASGGASSNPFSGRTRGEEQSNAGASNSPFSAPVNRGGEARSNRPHIAVSPE
KLVDGLNPEQIEAVKHSGAPLLIVAGAGSGKTAVLTRRIAYLMGNRGVAPWEILAITFTN
KAAAEMKERVGQLVGPVAERMWVATFHSICVRILRQQAQLVPGLNTNFTIYDGDDSRRLL
TMIAKDMQLDIKKFTSRVLANQISNHKNEMTSPETALAEAEKTRNPFELTVARVFAEYQR
RLRAANAVDFDDLIGEVVRIFVQYPQVVSFYRRRFKHVLIDEYQDTNHAQYSLVAALVGQ
DDEESPELCVVGDSDQSIYAFRGATIRNIEDFERDYPGARTILLEQNYRSTQTILSAANA
VIAQNEGRRKKNLWTDHGEGEKIIGYVADNEHDEARFIASEIDALSDKGRHYSDIAIMYR
TNNASRALEDIFVRSGIPYKVVGGTRFYERREIRDVIAYLRILDNPDDSVSLRRIINVPK
RAIGDKAQAQIATHAENLNISFGKALYFAEQGEVPGLGTRAVNAVTKFNEMMAGIREQIP
AMTNEVTKQPDLGELVSAILDSTGYKGELEASNDPQDGARLDNLNELVSVAREFSSESAN
QLAFDGSDSDVEVAPELTEGEAAPGSLQAFLEKVALVADADQIPENESGVVTLMTLHTAK
GLEFPVVFLTGWEEGQFPHMRSLGDPKELSEERRLAYVGITRAREELYLTRAILRSSWGN
PLTNPASRFLGEIPEDLIDWRREEPQSSMGSAWDYDDSYSYGRSYDSSWSGWSRSSRSAA
TSPSQRTRSSKASESSMSKNKQLDLVVGDRVNHAKYGLGTVIAADGSGLRSTVTIDFGSA
GKVRLMLVGGLPMEKL
NT seq
2751 nt
NT seq
+upstream
nt +downstream
nt
atgcgcagcgaatcgaacaatcagtctcaaaacgagcaacagttcccagatgactttgat
cagctccctcttccgccactggagccggagccagagtttgcaccaccagaagatatagac
cagccaccagaagatgtgctggatctctttagggactccgccgtttccagcgaagaagcc
caggcgaagcgcaacccgttcgcgccagcttccggtggggcgtcttccaacccatttagc
ggtcggactcgcggcgaagagcagtcgaacgcaggtgcttcgaactcaccatttagcgca
ccggtgaaccgcggcggggaagcccgaagcaaccgaccacacattgcggtgagccctgag
aaattagtagacgggcttaaccctgagcagattgaagccgttaagcactctggtgcgccg
ctattgattgttgctggtgcaggctccggcaagacggccgtgctcacccgccgtattgct
tatctcatgggaaaccgtggggtagcgccgtgggaaattctggctattacctttaccaat
aaggctgccgctgagatgaaagagcgcgttggccagctagtagggccggttgctgaacgc
atgtgggtggcaaccttccactccatctgcgtgcgcattttgcgccagcaggcacagcta
gtgccggggctaaacaccaacttcaccatctatgacggcgatgactcacggcgtttgctc
accatgattgccaaagacatgcagctggacatcaagaagttcacctcacgcgtactggct
aaccagatttctaaccataagaacgaaatgacctcgccagagaccgcactggctgaggcc
gaaaagaccaggaacccgtttgagctcactgttgctcgcgtcttcgcggagtaccagcgc
cgcctgcgtgccgcgaatgcggtggattttgatgatctcatcggtgaagtcgtgcgcatc
tttgtgcagtacccacaggtagtgtcgttttatcgccgcaggttcaagcatgtgttaatt
gatgagtatcaggatacgaaccacgcccagtactcattggtcgcagcacttgtaggacaa
gatgatgaggaaagcccggagctatgcgtggtgggtgactccgatcagtccatctatgcc
ttccgtggcgcaaccattcgcaacatcgaagatttcgagcgtgactacccaggtgcgcgc
accattttgctggagcaaaactaccgctccacgcagaccatcttgagtgcagcgaatgcc
gtcatcgcgcaaaacgagggtcggcggaagaagaacctgtggaccgatcacggtgagggc
gagaaaattattggctacgttgccgataatgagcacgatgaagcgcgctttatcgcctct
gagattgatgccctgtccgataagggccgtcactactcggacattgcgattatgtaccgc
accaacaatgcatcacgtgcgctggaagatatctttgtccgctctggaattccgtacaaa
gttgttggtggcaccaggttctatgagcgccgcgaaatccgtgatgttattgcgtacctg
cgcatcctggataacccagatgactcagtgagcctgcgccgtattatcaatgtgccaaag
cgcgcgattggtgacaaagctcaggcgcagattgctacgcatgcagaaaacctcaacatc
agcttcggcaaagcactgtattttgccgagcaaggggaggtacctgggctgggaacccgc
gcagtcaatgctgttactaagttcaatgagatgatggcgggaatccgcgaacagatccca
gctatgaccaatgaggtgactaagcagcctgacttgggtgagctggttagcgcaatcctg
gattccaccggatacaaaggcgaattggaagcatcgaatgacccgcaagacggcgcacgc
ctggacaaccttaatgagttggtttcggttgcgcgtgagttctcttcggaatctgccaac
cagttagcctttgatggctcggactcagacgttgaggttgcacctgagctgacagaagga
gaagcagcgccgggctcgctgcaggctttcttggaaaaggttgccttggtggctgatgct
gatcagattcctgaaaacgaatctggtgtggtcacgctgatgactttgcacaccgcaaag
ggcttggaattccccgtcgtattcctcaccggctgggaggaagggcagttcccacacatg
cgctccctcggtgatccgaaggagctgagtgaggaacgccgcttggcgtacgtcggaatc
actcgcgcccgcgaagagctctatttgactcgtgcgattcttcgttcgtcgtggggtaac
ccgttgacgaatccggccagccgcttcctcggcgagatcccggaggatctcatcgactgg
cgccgtgaagaaccacaaagctcaatgggctctgcgtgggactacgacgattcttattct
tatggtcgttcttatgactcgagctggtctggttggagccgtagttcacggtccgccgcg
acatccccttcgcagcgaactcgctcttctaaggcatcagaaagctcgatgtccaagaac
aagcaattggatttagttgtcggtgaccgcgtcaaccacgccaagtatggcttgggcaca
gtcatcgctgccgatggctcaggtttgcgttccaccgtcaccatcgactttggttctgca
ggcaaggtcaggctcatgcttgttggcggcctgcctatggaaaagctctag
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