Corynebacterium casei: CCASEI_10340
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Entry
CCASEI_10340 CDS
T03041
Name
(GenBank) UvrABC system protein B
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
ccg
Corynebacterium casei
Pathway
ccg03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ccg00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
CCASEI_10340
09124 Replication and repair
03420 Nucleotide excision repair
CCASEI_10340
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccg03021
]
CCASEI_10340
03400 DNA repair and recombination proteins [BR:
ccg03400
]
CCASEI_10340
Enzymes [BR:
ccg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CCASEI_10340
Transcription machinery [BR:
ccg03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
CCASEI_10340
DNA repair and recombination proteins [BR:
ccg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
CCASEI_10340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
DEAD
SNF2-rel_dom
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AHI20623
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All DBs
Position
2240850..2242481
Genome browser
AA seq
543 aa
AA seq
DB search
MNGPLIVQSDKTVLLEVDHPQAHEARAALAPFAELERAPEHIHTYRITPLALWNAKAAGH
DAEQAVHVLETFSRFPVPQALLVDVAETMSRYGRVRILKSPAHGLILESTEQAIIEELVR
HKKIGGMLGARIDDLSVSIPPSERGRIKQELLKVGWPAEDLAGYVDGEAHPIALDESGWA
LRDYQEYATDSFWEGGSGVVVLPCGAGKTIVGAAAMAKAKATTLILVTNTVAGRQWRDEL
LRRTTLTENEIGEYSGEKKEIKPVTIATYQVVTRKTKGEYRALELFDSRDWGLVIYDEVH
LLPAPVFRMTSDLQSRRRLGLTATLVREDGREGDVFSLIGPKRYDAPWKELEMSGFIAIA
DCVEVRVDMNAEERMVYATAENRDRYRISATADAKFTAVKEIIGRHAGQQMLIIGGYVEQ
LEDIAKRLDAPLIHGKTSNAQREKLFEAFRQGDIQVLVVSKVANFSIDLPEAAVAIQLSG
TFGSRQEEAQRLGRLLRPKADGGEATFYTLVTRDSIDATYALHRQRFLAEQGYAYRLLDA
SDL
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atgaatggtccgctgattgtgcagtctgataagacagtcttactcgaagtcgatcatccc
caggcgcatgaagctcgcgcggcgctcgctcccttcgcggagctcgagcgcgcaccggag
catatccacacttaccgcatcacgccgttggcgttgtggaacgcgaaggccgctggccac
gacgcggagcaggccgtgcacgtgctggagactttctcccgtttcccggtgccacaagca
ttgcttgtcgatgtcgccgagaccatgtcgcgttacggccgcgtccgaatcctcaagtcc
ccggcgcatggattgattctggaatccacggagcaggcgatcattgaagagctcgtccgg
cacaaaaagattggcgggatgctcggcgcacgcattgatgacttgtcggtttcaatcccg
ccgtcagagcgcgggcgaatcaagcaagaattgctcaaagtcggctggcccgccgaagac
ctcgccggctacgtcgatggtgaagcacatccgattgcgctcgatgagtccggctgggca
ctgcgtgattatcaggaatacgccaccgattctttctgggagggcggttccggtgtggtt
gtgctgccctgtggcgccggcaaaaccatcgtcggtgcagctgcaatggccaaggccaag
gccaccacgctcattctggtcaccaacaccgtggctggccgtcaatggcgcgatgagctg
ctgcgccgcacaacactgacagaaaatgagatcggcgaatactccggtgaaaagaaagag
atcaagccggtcaccatcgccacctaccaagtggtcacgcgtaaaaccaagggcgaatac
cgcgcgctggaactcttcgactctcgggattggggcctggtcatctatgacgaggtgcat
cttctgcccgcaccagttttccgcatgacctctgacctgcagtcacgccgccggctggga
ctcaccgcaactttggtgcgtgaagatggccgcgagggcgatgtcttctcactcatcggt
ccgaagcgctatgacgcgccgtggaaagaactggagatgtctggtttcatcgcgattgcc
gattgcgtcgaggtgcgcgtggacatgaacgccgaagaacgcatggtctatgccaccgca
gaaaaccgcgaccgctaccgcatctcagcaaccgcggacgcgaagtttacagccgtgaaa
gaaatcatcggcaggcatgctggccagcagatgctgatcatcggcggctacgtcgagcaa
ctagaagacatcgcaaagcggcttgatgctcccctcatccacggcaaaacctccaatgcc
caacgtgagaagctcttcgaagccttccgccaaggcgacatccaagtactggtggtctcc
aaggtggctaacttctccattgacctaccggaagctgccgtggcaatccagctatcggga
acctttggctcccgccaagaagaggctcaacgccttggccgactgcttcggccaaaggct
gatggaggcgaagcaacgttttacaccttggtcactcgcgatagtattgatgcaacttat
gctttgcaccggcaacgtttcttggccgagcaaggctatgcctaccggttgttagatgcc
agcgacctctag
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