Corynebacterium casei: CCASEI_10975 Help Entry CCASEI_10975      CDS       T03041                                  Name (GenBank) ribonuclease E   KO K08300   ribonuclease E [EC:3.1.26.12] Organism ccg  Corynebacterium casei Pathway ccg03018   RNA degradation Brite KEGG Orthology (KO) [BR:ccg00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    03018 RNA degradation     CCASEI_10975  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:ccg03019]     CCASEI_10975    03009 Ribosome biogenesis [BR:ccg03009]     CCASEI_10975 Enzymes [BR:ccg01000]  3. Hydrolases   3.1  Acting on ester bonds    3.1.26  Endoribonucleases producing 5'-phosphomonoesters     3.1.26.12  ribonuclease E      CCASEI_10975 Messenger RNA biogenesis [BR:ccg03019]  Prokaryotic type   Bacterial mRNA degradation factors    RNA degradosome components     Ribonucreases      CCASEI_10975 Ribosome biogenesis [BR:ccg03009]  Prokaryotic type   rRNA processing factors    CCASEI_10975 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  RNase_E_G IF2_N Motif Other DBs NCBI-ProteinID:  AHI20750 LinkDB All DBs Position complement(2381162..2385346) Genome browser AA seq 1394 aa AA seqDB search MATADEQLKEQLSGAAALAAQIDKEKLGDKVRVYSLAKQLGISSKLLIEQLHLQGISKRA QSALSAEEVGKVFDSLPGKESAPASAEAESAAAAEAEAEAEAPAPKARKAAKKASKVTKK TATKATKSTQKKTTRKSAAKSEAPVEVKDDAAAPAVEETSADAPQAEEAPQKKTRKRAVK KNTRKQTKKAAESTPIETAPAAEETPVDDAAVQAAVEAEAQAAVAEAAAAPVAEETLQTE TRKRSKTRRVVKRSAGTPEAPATESPVAETTAADNESEAESGDDSDKLRYRVQKNVENEI LQIEGKVESELAAVALEALAEKNHDGDDSEDSDEHDIQIDDSFVESLLTPPAPKKTEEDD VLAAYAPIFMPPQPASASNAAVKDASSDGDSADSHDDNAADGSSVRRRRGHRGTSRGRGK DTTTSANAANPEKPEVEIIDEPRGIKGSTRIESQRRRRAEMRSKDRENRHVVTQAEFLAR REAVERTMVVRERERHDGPDTITQVGVLEDGMLVEHFVTDETNTSSIGNIYLGRVQNVLP SMEAAFIDIGTGRNGVLYAGEVNWRQAGLGGRSRKIEQAMKSGDQVLVQVAKDPVGHKGP RLTTQISLPGRFLVYVPGGRNAGISRKLPAPERKRLKEILEKVVPDQGGAIIRTAAENVA EEAIAADVNRLHDRWNDIQESAKKEKSSKGSDPVALYEEPQMLVKVVRDLFNEDFDRLVV DGERPFEVVSSYVNRLAPELADRVFKYDRSENGGVDAFETYRIDEQLQKALSRKVWLPSG GTLVIDRTEAMTVVDVNTGKFTGTGGNLEETVTKNNLEAAEEVVRQMRLRDLGGMIVVDF IDMVLPENQELVLRRLKEALGRDRTRHQVSEVTSLGLVQMTRKRLGSGLLETFSTECEAC QGRGLILHEDPVEEGPFEAQPHDHRNDHRGDSRDNRGDQRRGHKNARDNARDNNQHDKHD NEPDDQHDQGDSHDEHEDSNAHSSERGSRRGQSRRSATKRAGRRGPSTRNEPRRNDSRRS GSSNDDSSLEDLIAGIVVDSSNVKNEDSRDDHRDAQRRAQRRSQRGSQRDAQRDSKQETQ HEDSGSGVRGVSDIESIAFAASDRAEALDEVGEFSSYVSEDKDSSADLSVKQGGKSYDEA VKEFEASPRRKRKTRGNSRSDHAPRPQDFDDAVAISKSSTDSDSDGDARSAKGSQDDAPA KEIKRDSKRRRVRATNRRQDTEQRPVNVGNGATEDSSTTERGAAKSASGQREDSARSEAK RAQVQAVTRGRRRAVRRVSQPRNPNQGAAAEKNAQAESREAANSGVETQRKRTESDVEVT TVRRGRKRAVRRVNPRAESQQETKQSGSGASEKKAAQRELQKNEQVSGQSSEQSTAQKSS GGRTRRRVARRGSK NT seq 4185 nt NT seq  +upstreamnt  +downstreamnt atggctacagcagacgaacaattgaaagaacaactatcgggtgccgcagcacttgctgcg cagattgataaagaaaaactgggggacaaggtccgcgtgtactcgctggccaagcagctt gggatttcctctaagctgttgattgaacagctacacctccagggcatctccaaaagggcg cagtccgcgctttccgcagaagaagtgggcaaggtatttgattccttgcctggcaaggaa agtgctccagcttctgcagaagcagaatcagcggcagcggcagaggcagaggcagaggca gaggcaccagctccgaaggcccgcaaggctgcgaagaaggcttcgaaagtaaccaagaag actgctacgaaggccacaaagtcgactcagaagaagacgacccgcaagagcgcggcgaag tctgaagcacctgtagaagttaaagatgatgccgcagccccagccgttgaagagacctcg gctgatgcccctcaagctgaagaagctccacagaagaagacccgcaagcgtgcggtaaag aagaacacccgtaagcagaccaagaaggctgctgaatcaacaccgattgaaactgcacct gccgcagaagaaactcctgtagatgacgctgctgtacaggcagcggtagaggcggaagct caggcagctgtggcagaagcagcagctgcacctgttgctgaggaaaccctacagaccgaa acacgtaagcgcagcaaaacacgtcgtgtggttaagcgttccgccggcactcctgaagct cctgcgacggagagcccagttgcagagacaaccgctgccgacaatgaatcagaggctgaa tccggcgatgacagcgataagctgcgctaccgcgttcagaagaacgtagaaaatgagatt ctgcagattgaaggcaaggtcgaatctgagctggctgcagtagctttggaagccttggcg gaaaagaaccacgacggcgatgactcggaagactccgatgagcatgacatccaaattgat gactcattcgttgagtcgctgctgactccacctgcgccaaagaagaccgaagaagacgac gttctggcggcttatgcaccgatctttatgccgccgcagccggcatcggcaagcaatgcg gcagtaaaggatgcatcctccgacggtgactctgcggactcccacgacgataatgctgcc gatggctcctctgtccgccgtcgccggggacaccgcggaacctcccgcggccgcggcaag gacacaaccacctccgccaacgctgcaaatccggagaagccggaagtagaaatcattgac gagccacgcggaatcaagggctcaacccgcattgaatcccagcggcgtcgccgcgccgaa atgcggtccaaagaccgcgagaaccgccacgttgtcacccaagccgaattcttggcgcgc cgggaagcagttgagcgcaccatggtcgtgcgcgaacgcgaacgccacgacggacctgac accattacccaggtcggtgtgctggaagacggcatgctggtcgagcacttcgtcaccgac gaaaccaatacctcgtccatcggcaacatctaccttggccgcgtgcaaaacgtcctcccg tctatggaagctgccttcattgacatcggaactggccgcaacggcgtgctttatgccggt gaagtgaactggcgtcaagcaggactgggcgggcgctcccgcaagattgaacaagccatg aagtccggcgaccaggtcctggtgcaggttgccaaagacccagtcgggcacaaggggcca agactgaccacgcagatttccttgccaggacgcttcttggtctacgttcctggtggccgc aacgcgggtatttcccgcaagcttcctgctcctgagcgcaagcgcctgaaggaaatcctg gaaaaggtggtaccagatcagggtggtgccatcatccgcaccgcggcggaaaacgtcgcg gaagaagccatcgcggcagatgttaaccgtttgcatgaccgatggaatgacatccaggaa tctgcgaagaaggaaaagtcctccaagggctctgacccagtggccctgtatgaagagccg cagatgctggtcaaggttgtccgcgacctgttcaatgaggactttgaccgcctggttgtt gatggtgagcgcccttttgaggttgtcagctcctacgtcaaccgtctggcaccagaactt gctgatcgcgtattcaaatatgaccgctccgaaaatggcggcgtcgatgccttcgagacc taccgcattgatgagcagctgcagaaggcactttcacgcaaggtctggttgccatcgggc ggcaccttggtcattgaccgcactgaagccatgaccgtggttgacgtcaacaccggtaag ttcaccggtactggcggcaacttggaagaaaccgtgacgaaaaacaacttggaagcagcc gaggaagttgtgcgtcagatgcgcctgcgtgaccttggcggcatgattgttgtggacttc attgatatggttctgcctgaaaaccaggagttggtcctgcgtcggttgaaggaagctttg ggccgtgaccgcacccgccaccaggtctctgaggtgacttccctgggtctggttcagatg acccgtaagcgcctgggctccgggctgctggagaccttttccaccgagtgtgaggcatgt cagggtcgtggccttatcctgcacgaggatccagtggaggaaggcccatttgaggcgcaa cctcacgatcatcgcaatgaccaccgtggcgatagccgcgataaccgtggtgaccagcgt cgtgggcacaagaacgctcgcgataacgcacgtgataacaaccagcacgacaagcatgac aacgagccagatgatcagcacgatcaaggcgattcgcacgatgagcatgaggacagcaat gctcatagttctgagcgcggcagccgtcgtgggcagtctcgccgcagcgccaccaagcgt gctgggcggcgtggaccatctacgcgcaacgagccacgccgtaatgactcacgccgtagt ggttccagcaacgatgattccagcctggaagatttgattgctggcatcgtggtggattcc tctaacgtcaagaatgaggatagccgtgatgaccaccgcgatgctcaacgtcgtgcgcag cgccgttcccagcgcggctcgcaacgagatgcgcagcgggattccaagcaagagactcag catgaagattcaggaagtggcgtgagaggtgtcagcgacatcgagtccattgcattcgcg gcttccgaccgtgctgaggcactcgatgaagtaggggagttctcttcttacgtctctgag gacaaggattcttctgcagacctttctgtaaagcagggcggcaagtcctatgacgaagca gtaaaggaatttgaggcatcacctcgccgcaagcgcaagacgcgcggtaactcccgcagt gaccatgcgccgcgcccgcaggacttcgatgatgcagtggcaataagcaagtcatccact gactcggattcggacggcgatgctcgttcggcgaaggggtcacaagatgatgctccagcc aaggaaatcaagcgtgattcgaagcgccgtcgtgttcgtgccaccaaccggaggcaggac actgaacagcgtcctgtgaacgtgggcaacggtgctaccgaagacagcagcaccactgag cgtggggcagcgaagagcgcttctgggcagcgcgaggattcggcgcgcagcgaggcaaag cgtgcgcaggtccaggcggttactcgtggacgccgtcgcgcggtgcgccgagtctcgcag ccgcgaaacccaaaccaaggtgcagcggctgagaagaatgcacaggctgagtcccgtgag gctgccaacagcggtgtggaaactcaacgcaagcgcacagaaagtgatgtggaggtaacc acggtgcgacgtggccgcaagcgtgctgttcgtcgtgtgaatccgcgtgcagaaagccag caggaaacgaagcagagtggatctggtgcttcggagaagaaggctgcacagcgtgagcta cagaagaatgagcaggtgagtggacagtcgagtgagcagtcgacagcgcagaagagctcc ggtggtcgtacccgccgtcgcgttgcacggcgcgggagcaagtaa

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