Corynebacterium casei: CCASEI_11220
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Entry
CCASEI_11220 CDS
T03041
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
ccg
Corynebacterium casei
Pathway
ccg03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ccg00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
CCASEI_11220
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccg03019
]
CCASEI_11220
03009 Ribosome biogenesis [BR:
ccg03009
]
CCASEI_11220
Messenger RNA biogenesis [BR:
ccg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
CCASEI_11220
Ribosome biogenesis [BR:
ccg03009
]
Eukaryotic type
Pre-60S particles
RNases
CCASEI_11220
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
AHI20799
UniProt:
A0ABN4CEM4
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All DBs
Position
2442411..2443058
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AA seq
215 aa
AA seq
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MIAMSSTHTPAKHDRLVWIDLEMTGLDPKRHVIVEIAAIITDADLNIVGEGLDIVVHATE
KELAEMDDFVTNMHNSSGLTEEIKAATTSLADAESAVLSLIEEHCDPEHPAPLAGNSIAT
DRTFIREYMPRLDAALHYRMVDVSTIKELARRWHPRAYFNQPEKGMAHRALADIVESIRE
LDYYRRSVFRSDEGPTSTEATEAAKKSNASYQAFL
NT seq
648 nt
NT seq
+upstream
nt +downstream
nt
atgattgctatgtcttctacgcacactcccgcgaaacatgaccgcctcgtatggattgac
cttgaaatgacaggcctcgatccaaagcgccatgtcattgtggaaatcgccgcgatcatc
acggatgccgatctcaatatcgtcggcgaagggctcgacattgtcgttcacgccactgag
aaagagctggcagaaatggatgatttcgtcaccaatatgcacaactcatcggggctcacc
gaggagatcaaggccgcaacaacatcgctagccgatgccgaatcagcagtactctccctt
attgaagaacattgcgatccggaacacccagcaccgctagcaggcaactccattgccact
gaccgcaccttcatccgcgaatacatgcctcgcctggacgcagccctgcattaccgcatg
gtggatgtctccaccatcaaggaacttgcacgccgctggcacccacgcgcatacttcaac
caacccgagaagggcatggcccaccgcgcactcgccgacatcgtggaatccatccgcgaa
ttggactactaccgccgctccgtattccgctcagatgaaggcccaacctccactgaagca
accgaagcagcgaagaagtcaaacgcttcttaccaggcgtttttgtaa
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