Corynebacterium casei: CCASEI_11555
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Entry
CCASEI_11555 CDS
T03041
Name
(GenBank) conjugative relaxase domain protein, TrwC/TraI family
Organism
ccg
Corynebacterium casei
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TrwC
AAA_30
AAA_19
Viral_helicase1
UvrD_C_2
TraI_hel_assoc_N
AAA_11
AAA_22
AAA_16
NACHT
AAA
AAA_33
Motif
Other DBs
NCBI-ProteinID:
AHI20865
LinkDB
All DBs
Position
complement(2529450..2533016)
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AA seq
1188 aa
AA seq
DB search
MTIRPMSAGRGYEYLLKTVAAGDGDRDLGTPLTRYYTESGSPPGTWLGTGLASLDDGTGT
GVDEGSTVTEEHLARLLGQGVHPVTGAKLGHAYPSLRPPRERIADRVAKLAPDMPAAQRE
VMIQDIRDEEAARKPKSAIAGFDLTFSPPKSLSTLWGVADAPMQELLAQAHHAAMRDTVA
MLEERVASTRVGKGGIARMPITGVIATAFDHYDSRAADPQLHTHLVVSNKVQGEDGKWRS
LDSRRLHKATVALSASYNAYLIDHTADLLGLTWEPVDRGKDRNTGWEITGIPAELIAEFS
RRSTGSSGGVEGIEQAKNRLIRDYRDAHGHAPSPDTIARLRQQATLETRPEKELHSLAEL
TADWRERATRLLGTDATTWAQDVLTRTPDASRLRAEDLGAQQVEDLAAVVVMTVADRRST
WTRWNLHAEAMRQLMSTRFTTPAERTAVLDQIVAGAEAQSLRLTPEYDRAVPGHYVDGSG
NRFQSSDQVAYSSQEILDAEHRLLKHADDTSAPRLPSRMVARHVSRKIQGVRLADDQAAA
VTRIACSGRSLDLLVGPAGAGKTTALRGLHRAWTARHGQGSVIGLAPSAAAAEVLGESLG
VQAENTAKFLYEHERGRWDFQPGQLILLDEASLAGTLTLDRIAEHAGQAGAKLVLVGDPA
QLSSVETGGAFGMLVRHRPGPPTLTDARRFVHEWEKTASLDLRRGKTAVLEDYENHGRLV
DGSIERMLDAAYTAWQQDRDEGLATLMIAGNAEMVAELNTRAREDLIADGRVERDGIGLH
DGTTAGVGDLVVTRRNDRQLSLGRSWVKNGDRWSVARRLENGALAVRRLGPGDQPAGAEL
VLPAEYVAEDVELGYATTVHRAQGASVDTVHALVDPETASRELFYVAMTRGKQNNTAYII
QPDPHEIEPHLETAEPLTRIEQLHRVLARSDADLSATETLKHEVDRHASLATLVHEYDVL
AREAQVERSAAYLDVAPFPEAVADDVFTSPHYEQLEAAITRHEATGHSPTRVLTALAPRL
QPTSDEADPAAHLASMIDTATAQMTHGRTSTPGRVGGLIARPAEPLDEDMRTALRQREAL
IDAAAGAALDEAVDHKVGWATQLGAPGPSTREREWWRAHAVTIALYRQRYDIQSAAPLGS
DKDVESPQQADERRTAQVAYSRLRTQHSSSSLPRPERTSARRTSERGL
NT seq
3567 nt
NT seq
+upstream
nt +downstream
nt
atgacgatccgccctatgtccgccggccgcggctacgaatacctcctgaaaaccgtcgcc
gccggcgacggcgaccgcgacctgggcaccccgttgacccgctactacaccgagtccggc
agcccaccggggacctggctcggcaccggcctggcatccctggacgacggcaccggcacc
ggagtcgatgaggggtcgaccgtgacggaggagcacctggcccggttgctcgggcagggc
gtgcacccggtcaccggcgcgaaactcggccacgcctacccgagcctgcgcccaccgcgt
gagcggattgccgaccgggttgcaaagctcgccccggacatgccggcggcgcaacgtgag
gtcatgatccaggacatccgcgacgaagaggctgcacggaagcccaagagcgccattgca
ggtttcgacctgacgttctccccgccgaagtccctgagcaccctctggggtgttgcggat
gcaccgatgcaagagctgctggcacaggcccatcacgccgcgatgcgcgacaccgtcgcg
atgctggaagagcgggtggcctcgacccgggtcggcaagggtgggatcgcgcggatgccg
atcaccggcgtcatcgccaccgccttcgaccactacgactcgagagccgccgacccgcag
ctgcacacgcatctggtggtctcgaacaaggtccaaggcgaggacgggaagtggaggagc
ctggactcgcggcggctgcacaaggccaccgtcgctctctcggccagctacaacgcctac
ctcatcgaccacaccgccgacctgctcggcctgacctgggagcccgtcgaccgaggcaag
gacaggaacaccggctgggaaatcaccggcatccctgccgagttgatcgcggagttctcc
cgacgctccaccggcagcagtgggggagtggagggtatcgagcaggcgaagaaccggctc
atccgtgactaccgggacgctcacgggcacgcgcccagcccggacaccatcgcacgattg
cgccagcaagcaaccctggaaactcggcccgaaaaagagctgcattcgctggctgagctc
accgcagactggcgggagcgtgcaacccggctgctgggcaccgatgcaaccacctgggcg
caagacgtgctcacccgcacacccgatgcgtcccggttgcgtgccgaggacctcggcgcg
caacaggtcgaggacctggcagcggtggtggtgatgacggtcgcggatcggcgctcgacc
tggacgcggtggaatctgcacgctgaagccatgcgtcagctcatgtccacccgcttcacc
accccggccgagcgcaccgcagtgctggatcagatcgtggccggggcggaagcccagtcg
ctgcgcctgacacccgaatatgaccgtgcggtgccggggcactacgtcgacgggagtggg
aaccgcttccagtccagcgaccaggtcgcctattccagtcaggagatcctcgacgccgaa
caccgcctgctgaaacacgccgatgacacatccgcgccgcgactgccatcccggatggtt
gcccggcacgtctcccggaagatccagggcgtgaggctggccgatgatcaggccgccgcc
gtgactcgcatcgcttgttcggggcggagcctggacctgttggtcggccccgccggtgcg
gggaagaccaccgcgctgcgcgggctgcaccgtgcctggactgcccgccatgggcagggc
tccgtgatcggtttggctccctcggcggccgcggcggaagtcctcggggaatcgttgggc
gtgcaggccgagaacaccgccaagttcctctacgagcacgagagaggccggtgggacttc
cagcccggccagctgatcctgctcgatgaggccagtctcgccgggacgctgaccttggat
cggatcgctgaacacgcggggcaggccggggcgaagctggtgctcgtcggtgatccggct
cagctcagttccgtagaaaccggcggggcgttcgggatgctcgtgcgccaccgtcccggc
ccaccgacgctgaccgacgcgcgccggttcgtccacgagtgggagaagaccgccagcctc
gacctgcgccgcggcaagaccgccgtgctcgaggactacgagaaccacggccggctggtc
gacgggagcatcgagcgaatgcttgatgccgcctacactgcctggcagcaggaccgcgat
gaaggcctggcgacgctgatgatcgcgggcaacgccgagatggtcgccgagctgaacacc
cgcgcccgcgaggacctcatcgcggacgggcgcgtcgagcgcgacgggatcgggctgcat
gatggcaccactgccggggtaggggacttggtggtgacacggcgcaacgaccgccagctg
agtctcggccggtcctgggtgaagaacggcgaccgctggtccgtcgcccgcaggctcgag
aacggggcgctggccgtgcgccgcctcggccccggagaccagcctgctggggctgagctg
gtcctgccagcggagtatgtcgccgaggacgtcgagctcggctatgccaccacggtgcac
cgggcgcagggtgccagcgtggacaccgtccacgccctcgtcgatcccgagaccgcgtcc
cgcgagctgttctacgtggcaatgacccgcggcaagcagaacaacaccgcctacatcatc
cagcccgacccccacgagatcgaaccccacctggagacggcggaaccgctgactcgaatc
gagcaactgcaccgcgtgctggcccgcagtgatgctgacctctcggccaccgaaaccctg
aagcacgaagtcgatcggcacgcatctctggccacgctggtgcacgagtacgacgtgctc
gcccgggaagcacaggtcgagcggagcgccgcctatctggacgtcgcacccttccctgaa
gccgttgcggacgatgtgttcaccagcccgcactacgaacaacttgaagccgccatcacc
cgccacgaggcaacaggccattcgcccacccgcgtcctgaccgcgctggctccacgcctt
caaccgaccagcgacgaagccgaccccgccgcacacctggcgtcgatgatcgataccgcc
acggcccagatgacccacggcagaacctcgacgccgggacgagtcggaggcctcatcgcc
cgccccgctgagcccttggacgaggacatgcgcaccgcattacgccaacgtgaagctctc
atcgacgcggcggccggtgccgctctcgacgaggcggtggaccataaggtcggctgggcg
acgcagctcggagcaccggggcccagcacccgagagcgggagtggtggcgggcccatgca
gtgacgatcgccttgtatcgacagcgctacgacatccaaagcgcggcgccgctcgggtca
gacaaagatgtggagtccccgcagcaggcagacgaacggcgaaccgcgcaggtcgcctac
tcgcggctgcggacgcagcactcctcgagctcgctcccacggccagagcgcacctctgcg
cgacggacttccgagcgtggactgtag
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