Corynebacterium choanae: CCHOA_10915
Help
Entry
CCHOA_10915 CDS
T06925
Symbol
pdg
Name
(GenBank) Ultraviolet N-glycosylase/AP lyase
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
ccho
Corynebacterium choanae
Pathway
ccho03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ccho00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CCHOA_10915 (pdg)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ccho03400
]
CCHOA_10915 (pdg)
Enzymes [BR:
ccho01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
CCHOA_10915 (pdg)
DNA repair and recombination proteins [BR:
ccho03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CCHOA_10915 (pdg)
Prokaryotic type
CCHOA_10915 (pdg)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
Motif
Other DBs
NCBI-ProteinID:
AZA14561
UniProt:
A0A3G6J8W9
LinkDB
All DBs
Position
complement(2704163..2705113)
Genome browser
AA seq
316 aa
AA seq
DB search
MVRLPPQRVHSPSVAVAVAVAALTVWNAGLPVARLMRLGLAVATQAPTICASASRRQGRI
VSSQQHRSSDEPETTAPAGSEQQRRTAIVDRLSELYPEATCDLVFTNPFELLIATVLSAQ
TTDIRVNSVTPALFAAYPTPVELAGAHQTDVETIIRPLGLYRNKAAAIIALSAELLDKHQ
GQVPADRVALEALPGVGRKTANVVLPNGFGIPGFAVDTHVSRVAQRLGLVTTTTPTAIER
ELCTLVPETRWGQLSHELIWHGRTVCHAKRPACAACGLATWCPQSTTLGEQDHHIALQHV
TGPHAQDYLRHLQQLS
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
gtggtgcgactcccaccgcagcgggtacacagtccatctgttgctgttgctgttgctgtt
gctgctcttactgtatggaacgccggactcccagttgcccgcttaatgaggctagggtta
gccgtggcaactcaagccccaaccatttgcgcctcagcgtctcgacgacagggaagaatt
gtgtcatctcagcagcatcggtcatcggatgagcccgaaaccaccgcgcctgctggcagt
gagcagcaacgccgcacagccatcgtggatcgtctcagcgagctttatcctgaagcgacc
tgtgaccttgtgttcaccaacccctttgaactactcatcgccacggtattgtccgcacag
actaccgacatacgcgtcaacagtgtcacccctgcactctttgccgcctatcccaccccg
gtggaattagcaggagcgcatcaaacagacgttgagaccataatccgaccgctgggactg
taccgcaacaaagcagcagcgatcatcgcattatcggcagaactgctcgacaaacatcaa
gggcaagtccccgccgaccgagttgcgctggaagccctgcctggggtggggcgaaaaaca
gcaaacgtcgtcttaccaaacggatttgggataccaggatttgccgtcgacacccatgtg
agtcgggtcgcgcagcgtctagggctggtgaccaccaccaccccaacggccatcgaacgt
gaactgtgcacacttgtgccggaaacccggtgggggcaactgtcgcatgagcttatttgg
cacggtcgcacagtgtgtcatgcaaaacgacccgcctgtgccgcttgtggtcttgccacc
tggtgtccgcaaagcaccacacttggggaacaagatcaccacatcgcactacagcacgtc
accggcccgcatgcccaagactatttacgccatctgcagcagctctcttaa
DBGET
integrated database retrieval system
