Clostridium chauvoei: BTM20_11415
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Entry
BTM20_11415 CDS
T05083
Name
(GenBank) DNA-binding response regulator
KO
K18349
two-component system, OmpR family, response regulator VanR
Organism
cchv
Clostridium chauvoei
Pathway
cchv01502
Vancomycin resistance
cchv02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
cchv00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
BTM20_11415
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
BTM20_11415
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
cchv02022
]
BTM20_11415
01504 Antimicrobial resistance genes [BR:
cchv01504
]
BTM20_11415
Two-component system [BR:
cchv02022
]
OmpR family
VanS-VanR (VanE type vancomycin resistance)
BTM20_11415
Antimicrobial resistance genes [BR:
cchv01504
]
Gene sets
Vancomycin resistance modules
Vancomycin resistance, D-Ala-D-Ser type [MD:
M00652
]
BTM20_11415
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Response_reg
Trans_reg_C
cREC_REC
TrkA_N
Motif
Other DBs
NCBI-ProteinID:
ATD55807
LinkDB
All DBs
Position
complement(2482888..2483604)
Genome browser
AA seq
238 aa
AA seq
DB search
MSRERILIVDDEKEIRDLVEIYLKGEGYDTVKAENGEEALEMLKFNNIDLIILDIMMPKL
NGIEACLKIREEREMPIIMLSAKSEDLDKILGLNTGADDYLTKPFNPLELVARVKSQLRR
YKRFNKVTVVEENIIEQQSNILEIDEISINLDTHEVFRDGVEIKLTPTEFDILVLLGTNR
GKVFSIENIYNSVWKQEFMKSDNTVMVHIRKVREKIEEDPRKPRYIKTVWGVGYKIDR
NT seq
717 nt
NT seq
+upstream
nt +downstream
nt
atgagcagagaaagaattttaatagttgatgatgaaaaagagataagagatttagtagag
atatatttaaaaggcgaagggtatgatactgtaaaagctgaaaatggagaagaagcttta
gaaatgcttaagtttaataatatagatttaataattttagatataatgatgccaaaatta
aatggaatagaagcttgtttaaagataagagaagaaagagaaatgccaataataatgtta
tctgcaaaatcagaagacttggataaaatactaggtctaaatacaggagcagatgattat
ctaacaaagccttttaatcctttagaattagtagcgagagttaagtcacaacttagaaga
tataaaagatttaataaagtaacggtagtagaagaaaatataatagagcaacaatcaaat
attttagaaatagatgaaataagtataaatttagatacccatgaagtttttagagatgga
gttgaaataaaacttactccaactgaatttgatattttagttttacttggaactaataga
ggaaaagtctttagtattgaaaatatatataatagcgtttggaaacaagaatttatgaaa
tcagataatacagtaatggttcatataagaaaggtaagagaaaaaatagaggaggatcca
agaaagcctagatatataaaaactgtatggggggtaggttataaaattgataggtaa
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