Clostridium chauvoei: BTM20_12535 Help Entry BTM20_12535       CDS       T05083                                  Name (GenBank) DNA ligase (NAD(+)) LigA   KO K01972   DNA ligase (NAD+) [EC:6.5.1.2] Organism cchv  Clostridium chauvoei Pathway cchv03030   DNA replication cchv03410   Base excision repair cchv03420   Nucleotide excision repair cchv03430   Mismatch repair Brite KEGG Orthology (KO) [BR:cchv00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     BTM20_12535    03410 Base excision repair     BTM20_12535    03420 Nucleotide excision repair     BTM20_12535    03430 Mismatch repair     BTM20_12535  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:cchv03032]     BTM20_12535    03400 DNA repair and recombination proteins [BR:cchv03400]     BTM20_12535 Enzymes [BR:cchv01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.2  DNA ligase (NAD+)      BTM20_12535 DNA replication proteins [BR:cchv03032]  Prokaryotic type   DNA Replication Elongation Factors    Elongation factors (bacterial)     Other elongation factors      BTM20_12535 DNA repair and recombination proteins [BR:cchv03400]  Prokaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     DNA ligase      BTM20_12535    NER (nucleotide excision repair)     GGR (global genome repair) factors      BTM20_12535    MMR (mismatch excision repair)     DNA ligase      BTM20_12535   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     SHDIR (short-homology-dependent illegitimate recombination)      RecET pathway       BTM20_12535 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DNA_ligase_aden DNA_ligase_OB HHH_2 BRCT HHH_5 PTCB-BRCT HHH DNA_pol_lambd_f BRCT_2 5_3_exonuc Nlig-Ia RNA_ligase DNA_ligase_ZBD Cdd1 P2_N DUF669 Motif Other DBs NCBI-ProteinID:  ATD55984 UniProt:  A0ABD4RI42 LinkDB All DBs Position complement(2712193..2714184) Genome browser AA seq 663 aa AA seqDB search MDKEQRINELVEELNKYAYEYYSLDNPSVSDKEYDKKYDELKALEKETGYVLPYSPTLRV GDRVLEGFNKYTHKGRLWSLDKAQSFDEVKDWHNRNVKFVNEMNANGENLPPLRYVVTKK FDGLTVNLTYDNNGILAVAATRGTGEVGEDVTAQVQTIKSVPLKINCNDVFEVHGEAIMT TEAFEKYNKTSENPLKNLRNGAAGALRNLNVKETAKRNLSAFFYDIGYKEGTKFKNYQEM LEFIKAKGFPMDEYVRYCNTMDEVEKEIEYIKNIRFDLNYDIDGVVIAIDDIRTRELLGY TVKFPKWAIAFKFEAQEVTTKLLDVEWNVGRSGRVGPTAILEPVELAGVTVKRATLNNID DIRRKGVRIGAEVFVRRSNDVIPEIMGVVEESLEGTIEINVPNICPACGGHVIQQGVHYF CENTLSCKPQMVKTIVHFASRDAMNIEGFSERTAEQLFEKLDIKSISEVYKLEKESLVTL EKFGPKKAQNLLDAIEKSKNCELHRFIYALGIPNVGVKTAKDLVNKFKSIEGLKNATFED LVEVQDVGDIVAKCVMEFFKEEKVISTINELLNLGVNPIFEEKEIIESLFEGKTVVVTGT LQNYSRGSIKEKLEGFGAKVAGSVSKKTDYVIAGEEAGSKLKKAQELGVKVLSEEEFEEM IKG NT seq 1992 nt NT seq  +upstreamnt  +downstreamnt atggataaggagcaacgtataaacgagcttgtagaggaattaaacaagtatgcatatgag tattactctttagataacccatcggtatcggataaagagtatgataaaaagtatgatgaa ttaaaggctttagaaaaggaaacaggatatgtattaccatattcaccaacattaagggtt ggagatagagttttagaaggctttaataaatatacgcataagggtagactttggagttta gataaagctcaaagttttgatgaagttaaagattggcataatagaaatgtaaaatttgta aatgaaatgaatgctaatggtgaaaatcttccaccattaagatatgttgtaactaaaaaa tttgatggcctaacagtgaatttaacctatgataataatggtatattagcagtagctgca actagaggaactggagaagtgggagaagatgttactgcacaagtacaaacaataaaatca gtaccattaaaaataaattgcaacgatgtatttgaagtacatggtgaagctataatgact acagaggcttttgaaaaatataataaaacatcagagaatccgcttaaaaatttaagaaat ggtgcagcaggagctttaagaaacttaaatgttaaagaaactgctaagagaaatctttca gctttcttttatgatataggatataaagaaggaactaaatttaaaaattatcaagaaatg cttgaatttataaaagcaaaaggattccctatggatgagtatgttagatactgtaataca atggatgaagtagaaaaagaaatagagtatataaaaaatataagatttgatttaaattat gatattgatggagtagtaattgctatagatgatattagaactagggaattacttggatat acagttaaatttcctaaatgggcaattgctttcaaatttgaagcacaagaagtaacaaca aaacttcttgatgtagagtggaatgtaggaagaagtggtagagtaggacctacagcaata ttagaaccagtagaattagcaggagttactgtaaaaagagcaacattaaataatatagat gatattagacgaaaaggtgtaagaataggagcagaagtattcgttagaagatctaatgat gttattccagaaataatgggcgttgtagaagaaagcttagaagggacaatagaaataaat gtacctaatatatgtccagcttgtggaggacacgtaattcaacaaggagtacattacttc tgtgaaaatacattatcctgtaaaccacaaatggtaaaaacaatagtacattttgcatca agagatgctatgaatatagaaggattttcagaaagaacagcagaacagctatttgaaaaa ttagatataaagtcaatatcagaagtatataaattagaaaaagaatcccttgtaacacta gaaaagtttggtcctaaaaaggctcagaatcttttagatgctattgaaaaaagtaaaaac tgtgagttacatagatttatatatgctttaggcataccaaatgtaggtgtaaagacagca aaggacttagtaaataaatttaaatcaatagagggcttaaaaaatgctacatttgaagat ttagtggaagtccaagatgtaggtgatatagtggctaaatgtgtgatggagttctttaaa gaagaaaaggtaattagcacaattaacgaactattaaatttaggggtaaatcctatattt gaagaaaaagaaataatagaaagtttatttgaaggaaaaactgtagttgtaacaggaacg cttcaaaattattcaagaggttctataaaagaaaaactagaagggtttggagcaaaagtt gcaggtagcgttagtaaaaagacagattacgttatagcgggagaagaagccggttcaaaa cttaaaaaggctcaagagttaggcgttaaagtgctttcagaggaagagtttgaagaaatg ataaaggggtaa

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