Coprinopsis cinerea (gray shag): CC1G_00284
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Entry
CC1G_00284 CDS
T01275
Name
(RefSeq) ABC transporter
KO
K12608
CCR4-NOT complex subunit CAF16
Organism
cci
Coprinopsis cinerea (gray shag)
Pathway
cci03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cci00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CC1G_00284
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cci03019
]
CC1G_00284
Messenger RNA biogenesis [BR:
cci03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
CC1G_00284
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
AAA_21
AAA_25
AAA_29
SMC_N
RsgA_GTPase
AAA_15
AAA_23
AAA_28
PduV-EutP
ATP-synt_ab
MMR_HSR1
NACHT
AAA_22
Motif
Other DBs
NCBI-GeneID:
6013704
NCBI-ProteinID:
XP_001837148
UniProt:
A8NXE9
LinkDB
All DBs
Position
5
AA seq
295 aa
AA seq
DB search
MSSTSPDGEWAIQASNLTYHHVQTTEPSLVDINLTLPHGSRTILIGANGAGKSTLLQLLA
GKRLISGPGASVKVKGRDVFRNTPSGVTFLGTEWAMNPVVRGDITVSAFLDSVGGYRHKE
RRDHLLDILDIDLDWRMHMISDGERRRVQLCFGLMVPWDILLLDEVTVDLDVLVRSELLN
FLKEDSIKRKATILCKSLPALYHATHIFDGLNDFPTHVAHMRFGTFVEPPITWPLSSLGE
AKSSPLYNVALRWLQEDREERRRLEKQGRKMRGARRDQTVPSDSETFYRKYDYTH
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atgtcttccacttctcctgacggtgaatgggccattcaggcttccaacctcacttaccac
catgtacagactacagaaccttccctcgtcgatatcaacctcactctaccacatggttct
cgcacaattctaataggcgccaatggcgcgggcaaatctaccctcttgcagctcctcgct
ggtaaacgtcttatctccggtcctggggccagtgtcaaagtcaaaggtcgagatgtcttt
cgcaacactccgtcgggtgtgactttcttagggacggagtgggcgatgaatcctgttgtc
cgcggggatataactgtttcggcattcctggactctgtgggcggctacaggcataaagaa
cggagagaccacctcttggatattctggacatagacttggactggagaatgcatatgatc
tctgatggagagcggaggagagtacagctttgcttcggactcatggttccctgggatatt
cttctcctcgacgaagtgactgtcgatctcgacgtactcgtgcgaagcgagctcttgaac
tttttgaaggaagacagcattaagaggaaagcgaccatcttatgcaagtcacttcccgcc
ttatatcatgctacccatatctttgatggtttgaacgacttccctactcacgtcgctcat
atgcgctttggtacatttgtggaaccgccgattacatggcctttgagttcccttggggaa
gccaagtctagtccactttataacgtcgcgttgaggtggttgcaagaagatcgagaagag
cgaaggaggctggagaaacaagggcggaagatgcgaggtgctagacgagatcagactgtg
ccgtcagattctgaaacgttctaccgaaagtatgattacacgcactga
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