Cinclus cinclus (white-throated dipper): 134041927
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Entry
134041927 CDS
T10813
Symbol
MTR
Name
(RefSeq) methionine synthase
KO
K00548
5-methyltetrahydrofolate--homocysteine methyltransferase [EC:
2.1.1.13
]
Organism
ccic Cinclus cinclus (white-throated dipper)
Pathway
ccic00270
Cysteine and methionine metabolism
ccic00450
Selenocompound metabolism
ccic00670
One carbon pool by folate
ccic01100
Metabolic pathways
ccic01230
Biosynthesis of amino acids
ccic04980
Cobalamin transport and metabolism
ccic04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
ccic00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
134041927 (MTR)
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
134041927 (MTR)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
134041927 (MTR)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
134041927 (MTR)
04980 Cobalamin transport and metabolism
134041927 (MTR)
Enzymes [BR:
ccic01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.13 methionine synthase
134041927 (MTR)
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GFIT
Motif
Pfam:
Met_synt_B12
S-methyl_trans
Pterin_bind
B12-binding_2
B12-binding
CdhD
IPT
Motif
Other DBs
NCBI-GeneID:
134041927
NCBI-ProteinID:
XP_062344963
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All DBs
Position
3:complement(68214927..68263418)
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AA seq
1262 aa
AA seq
DB search
MALTGPPADLQKSVEDEIESILQERIMVLDGGMGTMIQQHALTEEDFRGHEFKDHSRPLK
GNNDLLSITQPDIIYDIHKEYLLSGADIIETNTFSSTRVAQADYGLEHLAYRLNRVSAQV
ARKAADTVTAQTGVRRYVAGALGPTNRTLSVSPSVERPDYRNITFDELVEAYTEQAKGLL
DGGVDILLVETIFDTANAKAALFALQMLFEEEYASRPIFVSGTIVDKSGRTLSGQTGEAF
VISVSHSKPLCIGLNCALGAVEMRPFIETIGKCTTAYIICYPNAGLPNTFGGYDETPEVT
ARHIKNFALDGLVNIVGGCCGTTPAHIRKIAEVVKFCKPRVPPSFSEGYMLLSGLEPFRI
GPYTNFVNIGERCNVAGSRKFAKLIMAGNYEEALSVAKLQVEMGAQILDINMDDGMLDGP
AAMTRFCNLISSEPDIAKVPLCIDSSNFSVIEAGLKCCQGKCIVNSISLKEGEEDFLEKA
RKIKLYGAAVVVMAFDEVGQATETETKIAVCSRAYHLLVEKVHFNPNDIIFDPNILTIGT
GMEEHNLYAINFINATKAIKETLPGARISGGLSNLSFSFRGMDAIREAMHGVFLYHAIKY
GMDMGIVNAGNLPVYDDIHKELLQLCENLIWNKDPDATEKLLHYAQNHAEGGKKLLQTDE
WRKGSVEERLEYALIKGIEKYVTADTEEARLNQEKYPRPLNVIEGPLMNGMKIVGDLFGA
GKMFLPQVIKSARVMKKAVGHLIPYMEKEREERRAKQGSTEEEDPYQGTIVLATVKGDVH
DIGKNIVGVVLGCNNFRVIDLGVMTPCDKILRAAVENKADIIGLSGLITPSLDEMIFVAK
EMERLAIKIPLLIGGATTSKTHTAVKIAPRYSAPVVHVLDASKSVVVCSQLLDDSVKDDF
FEEILEEYEEIRQEHYESLKERRYLTLQQARRKGFHNNWLSGHIPVKPKFIGTKVFEDYD
LRRLIEYIDWKPFFDVWQLRGKYPNRSFPKIFNDKTVGEEAKRVYNDAQDLLKAMINEKK
LQARGVIGFWPAQSVQDDIHLYAVEEAVGSSEPIAKFYGLRQQAEKDSACTDPYYCLSDF
IAPLDSGICDYLGLFAVACFGVDDLCNEFRKQDDEYNIIMVKALGDRLAEAFAEELHERV
RREFWAYSSSEQLDLSGLRKIKYEGIRPAPGYPSQPDHTEKLTMWKLANIEETTGIGLTE
SLAMIPASAVSGLYFSSPSSKYFAVGKICKDQVEDYALRKNLSVAEVEKWLEPILGYDTE
QL
NT seq
3789 nt
NT seq
+upstream
nt +downstream
nt
atggcgctcacggggccgccggcagatctccagaaaagtgtggaagatgaaattgaatct
attctgcaggagcggataatggttttggatgggggcatggggaccatgatccagcaacat
gcgctgacagaagaggatttccgagggcatgaatttaaagatcattccaggcctctgaaa
ggcaataatgaccttctcagtataactcagcctgatataatctatgacatacacaaggaa
tacttgctgtcaggcgctgacatcattgaaaccaacactttcagcagcacccgagttgca
caggctgactacggccttgagcatttggcatatcgattaaacagagtctctgcacaggtg
gccagaaaagcagcagacactgtaactgctcagacaggagttaggagatacgttgctgga
gccctgggtccaacaaacaggacactctctgtgtcaccatctgtggagagaccagattac
aggaacataacttttgatgaactggttgaggcctatacagaacaagccaaaggacttttg
gatggaggagttgacattttactggtggaaaccatatttgatactgccaatgctaaggca
gctctttttgcactccagatgttgtttgaggaagagtatgcttcccgacccatatttgtt
tctggaactattgtggataagagtgggcgtaccctctctggccagacaggagaggcattt
gtcattagtgtttcccacagtaagccactttgtattggcttaaattgtgctttaggggca
gttgaaatgcgtccattcattgaaacaattggaaaatgtacaaccgcctacatcatctgt
taccccaatgcaggtcttcccaatacttttggtggttatgatgaaactccagaagtgact
gccaggcatataaagaattttgctttggatggtttggtcaacatagttggaggttgctgt
ggtaccacaccagcacatatcagaaaaattgctgaagttgtgaaattctgtaagcctcgt
gttccgccttctttctctgaaggatacatgctgctgtcaggtctggagccattcaggatt
gggccgtacaccaacttcgttaatattggtgaacgctgcaatgttgccggatcacggaag
tttgctaaactcatcatggcgggcaactatgaagaagccctgagtgtagccaaattgcaa
gttgagatgggggcccagattcttgacataaatatggatgatgggatgttggatggcccc
gctgcaatgaccagattttgtaacttgatttcttcagaacctgatattgcaaaggtgcca
ttatgcatagactcctcaaatttttcagtaattgaagcaggtttgaaatgttgccaaggg
aaatgcattgtaaacagcatcagtctaaaggaaggtgaggaagactttctggagaaagca
aggaaaattaaattatatggagcagctgtggttgttatggcttttgatgaagtggggcag
gcaacagaaacagaaaccaagattgcagtctgttccagagcttatcatctccttgtggaa
aaagtgcacttcaatccaaatgatataatattcgaccctaatattttgaccatagggact
ggaatggaagaacacaacctttatgccataaattttatcaatgctactaaagctataaaa
gaaacgctgccaggagccaggataagtggaggtctttccaatctgtccttctcctttcga
ggaatggatgccattcgagaagcaatgcacggagtgttcctttaccacgcgattaagtat
ggcatggacatgggaattgtgaatgctgggaatctgcctgtgtatgatgatatccacaag
gaattgctacagctgtgcgagaatctaatctggaacaaagatcctgatgcgacagagaag
cttctacattatgctcagaatcatgccgaaggaggaaaaaaacttttacagactgatgag
tggcgtaaaggctctgtggaggaaaggctggaatatgctctcataaagggcattgagaag
tatgtcactgcagatacagaagaagcaagattaaatcaggaaaaatatcctagacctcta
aatgtaattgaagggcctttgatgaatggcatgaaaattgttggtgatctttttggtgct
ggaaagatgtttctgcctcaggtgataaagtctgctcgagttatgaagaaagcagttggc
caccttattccctatatggaaaaagaaagagaggaaaggagagccaagcagggcagcaca
gaagaagaggatccttaccagggtacaatagtactggcaactgtgaagggagatgtacat
gatatcggcaagaacattgtgggagttgttctgggctgcaacaacttcagagttattgat
ttaggagtcatgactccatgtgataagatattaagagctgctgttgagaacaaagcagat
ataattggcctgtctggtctcatcaccccatctttggatgagatgatttttgtcgcgaag
gaaatggagagattggcaataaagattcctttgctcattggaggagcaactacttctaaa
acacacacagctgttaaaattgccccacgatatagtgcacctgtagttcatgtcctggat
gcatccaagagtgttgtggtttgctcccagctcttggatgacagtgtaaaggatgatttc
tttgaagaaatattagaggaatatgaagaaattagacaagaacactatgagtctctcaag
gaaagaagatacttgactctacagcaagctagaagaaaaggtttccataataattggtta
tcaggccatataccagttaaaccaaaattcattggcacaaaagtctttgaagattatgac
ctgaggaggctgatagagtacattgactggaagcccttcttcgacgtctggcaacttagg
ggaaagtatcccaaccggagtttccctaagatctttaatgataaaactgtaggtgaagaa
gcaaagagagtttataacgatgctcaagatctactaaaagcaatgattaatgaaaagaaa
ttacaagcaagaggtgtgattggcttctggccagctcaaagtgttcaagatgatatccac
ttgtatgctgtagaagaggcagtgggatcttcagaaccaatagcaaaattttatggattg
aggcaacaggctgaaaaggactctgcctgcacagatccatattactgtctctctgacttc
atagcaccactggattctggcatttgtgactacttaggcctgtttgctgtggcctgcttt
ggtgtagatgatttgtgcaatgaatttaggaaacaggatgatgaatacaacatcataatg
gtgaaggctctcggtgatcggctggcagaggcatttgctgaggaacttcatgaaagagtt
cgaagggaattctgggcttacagtagtagtgagcagctggatctctctggcctacgcaaa
attaaatatgagggaattcgccctgcccctggatatcccagccagcctgaccatacagaa
aaactcaccatgtggaaacttgcaaacattgaagaaaccacaggaattggtctaacagaa
tcactagcaatgatacctgcctctgcagtttctggcctctacttttccagtcccagttcc
aaatattttgctgttggcaagatatgtaaagatcaggttgaagattatgcactgagaaaa
aatttgtctgtggcagaggtggagaagtggctggaacccattttgggatatgatactgaa
caactgtga
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