Cinclus cinclus (white-throated dipper): 134042480
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Entry
134042480 CDS
T10813
Symbol
GRIK2
Name
(RefSeq) glutamate receptor ionotropic, kainate 2
KO
K05202
glutamate receptor, ionotropic kainate 2
Organism
ccic Cinclus cinclus (white-throated dipper)
Pathway
ccic04080
Neuroactive ligand-receptor interaction
ccic04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
ccic00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
134042480 (GRIK2)
04082 Neuroactive ligand signaling
134042480 (GRIK2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ccic04040
]
134042480 (GRIK2)
Ion channels [BR:
ccic04040
]
Ligand-gated channels
Glutamate (ionotropic)
134042480 (GRIK2)
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Paralog
GFIT
Motif
Pfam:
ANF_receptor
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
Peripla_BP_6
Motif
Other DBs
NCBI-GeneID:
134042480
NCBI-ProteinID:
XP_062345892
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All DBs
Position
3:41091711..41445962
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AA seq
908 aa
AA seq
DB search
MKIISHIVTNSVFRCIIRLLLCLLWIGYSQGTTHVLRFGGIFECVESGPMGAEELAFRFA
VNTINRNRTLLPNTTLTYDTQKINLYDSFEASKKACDQLSLGVAAIFGPSHSSSANAVQS
ICNALGVPHIQTRWKHQVSDNKDSFYVSLYPDFSSLSRAILDLVQFFKWKTVTVVYDDST
GLIRLQELIKAPSRYNLRLKIRQLPADTKDAKPLLKEMKRGKEFHVIFDCSHEMAAGILK
QALAMGMMTEYYHYIFTTLDLFALDVEPYRYSGVNMTGFRILNTENTQVSSIIEKWSMER
LQAPPKPDSGLLDGFMTTDAALMYDAVHVVSVAVQQFPQMTVSSLQCNRHKPWRFGTRFM
SLIKEAHWEGLTGRITFNKTNGLRTDFDLDVISLKEEGLEKVGTWDPLSGLNMTENQKGK
PANITDSLSNRSLIVTTILEEPYVMFKKSDKPLYGNDRFEGYCIDLLRELSTILGFSYEI
RLVEDGKYGAQEDASGQWNGMVRELIDHKADLAVAPLAITYVREKVIDFSKPFMTLGISI
LYRKPNGTNPGVFSFLNPLSPDIWMYILLAYLGVSCVLFVIARFSPYEWYNPHPCNPDSD
VVENNFTLLNSFWFGVGALMQQGSELMPKALSTRIVGGIWWFFTLIIISSYTANLAAFLT
VERMESPIDSADDLAKQTKIEYGAVEDGATMTFFKKSKISTYDKMWAFMSSRRQSVLVKS
NEEGIQRVLTSDYAFLMESTTIEFVTQRNCNLTQIGGLIDSKGYGVGTPMGSPYRDKITI
AILQLQEEGKLHMMKEKWWRGNGCPEEESKEASALGVQNIGGIFIVLAAGLVLSVFVAVG
EFLYKSKKNAQLEKRSFCSAMVEELRMSLKCQRRLKHKPQAPVIVKTEEVINMHTFNDRR
LPGKETMA
NT seq
2727 nt
NT seq
+upstream
nt +downstream
nt
atgaagattatttcccatattgtaactaattcagtcttcagatgcatcattagactcctt
ctttgcttactgtggattggatattctcaaggaaccacacatgtattaagatttggaggc
atttttgagtgtgtggaatctggtccaatgggagcagaagaattggccttcagatttgct
gtgaacacaatcaacagaaacagaactcttctgccaaacaccacattgacatacgacacg
caaaagataaatctctatgacagttttgaagcatcaaaaaaagcctgtgatcagctgtcc
cttggggtggcagccatcttcggaccatcccacagctcctcggctaacgctgtgcaatcc
atctgcaacgctttgggagtcccacatatccagacccgctggaaacatcaggtgtcagac
aacaaggactccttctatgtcagcctctatccggatttctcttcactcagccgtgccatc
cttgaccttgtgcagttcttcaagtggaaaacagttactgttgtttacgatgacagcact
ggtctcattcgattacaagagctcatcaaggctccatcacgatacaacctaagactaaaa
atccgtcagttaccagctgacacaaaagatgcaaagccattgctaaaggagatgaaaaga
ggcaaagaattccatgtaatctttgactgcagccatgaaatggcagcaggcatcttgaaa
caggctttagctatggggatgatgacagaatactatcactatatctttaccacactggac
ctgtttgccttggatgtggagccctatcggtacagtggtgttaatatgactggattcaga
attctaaacacggaaaatacccaggtgtcatctatcattgagaagtggtctatggagcgc
ttgcaagcacccccaaagcctgattcaggtttgctggatggatttatgacgacggatgca
gcgctgatgtatgatgctgtccatgtggtgtcggtggctgtccagcagttcccacagatg
actgtcagctcgctgcagtgcaaccgccacaagccatggcgctttgggacccgcttcatg
agtctcatcaaggaggcccactgggaaggcctcacaggcaggataactttcaacaaaact
aatggcttaaggacagattttgatttggatgtcatcagcctcaaggaagaaggtcttgaa
aaggttggaacttgggatccattgagcggccttaacatgacagagaatcagaaaggaaaa
ccagcaaacatcacagattccctttccaatcgctctttaattgttactaccatcttggaa
gagccatatgttatgttcaagaagtctgacaaacccttgtatggaaatgatcgtttcgaa
ggttattgtattgacctcctcagggagctgtctactatccttggattttcctatgagatt
agactggtggaagatggaaaatatggagcccaagaagatgccagtggacagtggaatgga
atggttcgtgaactaattgatcataaagctgaccttgcagttgcaccattggcaattacc
tatgttcgtgagaaggtcatcgacttttccaagccctttatgactcttggaataagtatt
ttgtaccgcaagcccaatggtacaaacccgggcgtcttctccttcctgaatcctctctcc
cctgatatctggatgtatattctgctggcttacttgggtgtcagttgtgtgctctttgtc
atagccaggtttagtccctatgagtggtataatccacatccttgcaaccctgattcagac
gtggtggaaaacaattttaccttgctaaatagtttctggtttggagttggagctctcatg
cagcaaggttctgagctcatgcctaaggccctctccaccaggatagtgggaggcatttgg
tggtttttcacacttatcatcatttcctcgtacactgctaacctagccgcctttctgaca
gtggaacgtatggaatccccgattgattctgctgatgatttggccaagcagacaaagata
gagtacggggcagttgaagatggagcaaccatgacttttttcaagaaatccaaaatctcc
acttatgacaagatgtgggccttcatgagcagcaggaggcagtcagtacttgtcaaaagc
aatgaagaaggcatccaacgcgtccttacctctgattacgcatttttaatggagtcgaca
accattgagtttgtcacacagaggaactgtaacctaacacagattggaggcctgatagac
tccaaaggttacggcgttggaactcccatgggttctccatatagagacaagatcactata
gcaattcttcagctgcaggaagaaggcaagctccacatgatgaaagagaaatggtggcga
ggcaatggttgcccagaagaggaaagtaaagaggccagtgctttgggagttcaaaacatt
ggaggaatcttcatcgtgctggcagcaggattggtgctttctgtctttgtggcagttggg
gagtttttgtataaatcaaaaaaaaatgcccagttggaaaagaggtccttctgtagtgcc
atggtagaggaactaaggatgtccctgaagtgtcagcgtcgattaaaacacaagccacag
gcacctgttattgtgaaaacagaagaagttatcaacatgcacacatttaacgacagaagg
ttgccaggtaaagaaaccatggcatag
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