Cinclus cinclus (white-throated dipper): 134042501
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Entry
134042501 CDS
T10813
Symbol
DSE
Name
(RefSeq) dermatan-sulfate epimerase isoform X1
KO
K01794
chondroitin-glucuronate 5-epimerase [EC:
5.1.3.19
]
Organism
ccic Cinclus cinclus (white-throated dipper)
Pathway
ccic00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
ccic01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ccic00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
134042501 (DSE)
Enzymes [BR:
ccic01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.19 chondroitin-glucuronate 5-epimerase
134042501 (DSE)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4962
Motif
Other DBs
NCBI-GeneID:
134042501
NCBI-ProteinID:
XP_062345939
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All DBs
Position
3:47806985..47841582
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AA seq
988 aa
AA seq
DB search
MMLSSTLGTWSGHFKDGLAAIETWRSDATMRTHTRGAPSVFFIHAVCFAFACGAREDQDT
MVPFVNANYDSYPMLYFSKGDVETLRLQARTTHQHIAARLIEAVQTMLSNPLEYLPPWDP
KEFSARWNEIYGNNLGALAMFCVLFPENMEAINMAKDYMERMAAQPSWLVKDAPWDEVPL
AHSLVGFATAYDFLYSYLSKIQQERFLEVIANASGYMYETSYRRGWGFQYLHNHQPTNCV
ALLAGSLVLMNQGYLQEAYLWTKQVLAIMEKSVVLLQEVTDGSLYEGVAYGSYTTRSLFQ
YMFLVQRHFDINHFSHPWLKQHFAFMYRTVLPGFQRTVAIADSNYNWFYGPESQLVFLDK
FVMRNGSGNWLAEQIRKNRVVEGPGTPSKGQRWCTLHTEFLWYDASLRSVPPPDYGVPKL
HYFEDWGVVTYGSALPAEINRPFLSFKSGKLGGRAIYDIVHKNKYKEWIKGWRNFNAGHE
HPDQNSFTFAPNGVPFITEALYGPKYTFLNNVLMFSPAVSKSCFSPWEGQITEDCSSKWL
KYKHDLAGDCQGRVVAAMERSGVVFIRGEGVGAYNPKLKLRKLQRNLVLLHPQLLLLVDQ
IHLEDDSPLEAATSFFHNVDVPFEETVVDDVHGAFIRHRDGIYKMYWMDDTGHSEKATIA
SRMYPRGYPYNGTNYVNVTTLLRHPVTRAIYLFIGPSVDVQSFTVRGDSPQLDVFVTTGE
HAYAVYLWPIEDGSRSAFAQVIADRQKIVFDRASAIRSSTVPEVKDYIGIVERNLQHFKP
VFQQLEKQILSRVRNTASFRKTAERLLRFSDKRQTEEAIDRIFAISQRQQQQQRGRAKKN
RKVAKGYKFVDAVPDIFAQIEVNERKVRQKAQTQAQKELPVDEDEEMKDLLDFADITYVK
HKTGVSIKGRSGLAQMVATARSAPSISASYTRLFLILNIAIFFVMLAMQLTYFQKAKRLH
GQRCLYAILLVDSCILLWLYSSCSQSQC
NT seq
2967 nt
NT seq
+upstream
nt +downstream
nt
atgatgctttcatccactcttgggacatggtcaggacatttcaaagatggtttggctgcc
attgagacctggagatctgatgccacaatgaggactcacacacggggagccccaagtgtg
tttttcatacacgcggtttgctttgcctttgcctgcggcgccagggaggaccaggacacg
atggttccttttgtcaatgccaactatgacagctaccccatgctctacttctccaagggg
gatgtggagactctgcggctccaggcccgcaccacgcaccagcacattgcagctcgtctg
attgaagcagtgcaaaccatgctgtccaatcccctggagtaccttcctccctgggaccca
aaggagttcagcgctcgctggaatgaaatttatggcaacaaccttggggccctggcaatg
ttctgtgtgctcttccctgaaaacatggaggccatcaatatggccaaggattacatggag
aggatggcggctcagcctagttggctagtgaaggatgccccctgggatgaagtccctctt
gctcactccttggttggttttgccactgcttatgacttcttgtacagctaccttagcaag
attcaacaggagagatttcttgaagtaattgccaatgcctcaggatacatgtacgaaaca
tcatacagacgtggatggggtttccagtacctgcacaaccaccagcctaccaactgtgtg
gccctgctggctggaagcctggttctgatgaatcaaggctatcttcaggaagcttacctg
tggaccaagcaagtgttggccatcatggagaagtcagtagtcctgctgcaggaggtcaca
gatggctccctctatgaaggggtggcttatggcagctacacaaccagatcactgtttcag
tacatgtttcttgtccaaaggcattttgacatcaatcacttcagccacccctggctcaag
cagcactttgcatttatgtacaggactgtcctaccagggttccagagaaccgtggccatc
gcggattccaactacaactggttctacgggccggagagccagctggtgtttctcgacaaa
tttgtcatgcgcaatggcagtgggaactggttggcagagcagatcagaaagaaccgagtg
gtggagggcccaggcacaccatccaaagggcagaggtggtgcactctccacactgaattt
ctctggtatgatgcaagtttgcgttctgtacctccaccggactatggggttcctaagctg
cattattttgaggactggggagtggtaacttatggaagtgctttgccagctgaaatcaac
aggcctttcctttcattcaagtcaggaaagctgggaggacgtgcaatatatgatattgtt
cataagaataagtacaaagagtggatcaaggggtggaggaactttaatgctggccatgaa
cacccagaccagaactcctttactttcgctcccaatggtgtacctttcataacagaagct
ctgtatgggccaaaatatacttttttaaataatgtgttgatgttttcccctgctgtatcc
aagagctgcttctccccatgggaagggcagatcacagaagactgttcctcaaagtggctt
aaatataaacatgacttggctggtgactgtcagggtcgagtggttgccgccatggaaaga
agcggggtggttttcatcaggggagaaggagtgggtgcatacaatcctaaactgaagctg
agaaaattgcaacgaaaccttgtacttctccatcctcagcttctcttgctagtggaccaa
atccacttagaagatgacagccctctggaggcagcgaccagtttcttccacaatgtggat
gtgccttttgaagaaacagttgttgatgatgtccatggggcctttattaggcaccgtgat
gggatatataagatgtactggatggacgacactggccacagtgagaaagccaccattgcc
tcaaggatgtatccccggggctacccctacaatggaacaaactacgtgaatgtaacgacc
ctgctacggcacccagtcaccagggccatttaccttttcattgggccctctgtggacgtg
cagagcttcaccgtgcgtggagattccccacagctggatgtttttgtgaccactggtgag
cacgcctacgctgtgtacctatggcccatcgaggatggctcccgctctgcctttgcacag
gttattgcagaccgccagaaaattgtctttgaccgagcctctgccattagaagctccaca
gtgccagaagtgaaggactacatagggatcgtggagaggaacctgcaacattttaagcct
gttttccagcagcttgagaagcagatcctgtctcgtgtacgcaacacggccagctttagg
aagaccgccgagcgtctgctgaggttttcagataagagacagacagaggaggccattgac
aggatatttgcaatctcacagaggcagcagcagcagcagcgtggcagagcaaagaaaaac
aggaaggtagccaaaggctacaaatttgttgatgccgttcctgacatttttgcacaaatt
gaggtaaatgaaagaaaagtgcgacaaaaggcacagactcaagcacaaaaagagttgcct
gtagatgaagacgaggaaatgaaagatcttctggattttgcagatatcacttatgtgaag
cacaaaactggggtgtcaatcaaaggccgatcagggctggcacagatggtggcaactgct
cgaagtgccccatcaatatcagcttcctatactcgcctctttctaattctcaacattgct
attttttttgtcatgttagcaatgcagctcacatatttccagaaggccaagagactgcat
ggccaaagatgtctgtatgcaatacttttagtagacagctgtatattattgtggctgtat
tcttcctgttctcagtcacaatgttag
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