Cinclus cinclus (white-throated dipper): 134043544
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Entry
134043544 CDS
T10813
Symbol
LEMD3
Name
(RefSeq) inner nuclear membrane protein Man1 isoform X1
KO
K19410
inner nuclear membrane protein Man1
Organism
ccic Cinclus cinclus (white-throated dipper)
Pathway
ccic04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
ccic00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
134043544 (LEMD3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ccic04812
]
134043544 (LEMD3)
Cytoskeleton proteins [BR:
ccic04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filament-binding proteins
134043544 (LEMD3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MSC
LEM
RBM39linker
Motif
Other DBs
NCBI-GeneID:
134043544
NCBI-ProteinID:
XP_062347975
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Position
4:43750696..43793133
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AA seq
912 aa
AA seq
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MAMAAQLTDEELFSELRRFGFSPGPVTESTRPVYLKKLKKLREDERAGARGGGANKTRNS
NNNNTGAGAAPGGGGGPGRAAPGARLAGAEHPFLPGAAAGGGRGRPAPPAGGGKVLLGFS
SDESDVESSPRSPAGGRRERAAPLFRGLRPAAPHSACGVSSSSPPEEAARRKPNAWWGAA
ARRPAATQGVRESGDGEEEDDEEEEKESEQQRWKNRTVNGNRLLSYGGGRDKYSDSEEEE
AAGARAKQQGPKEESAVRRPRRSLSKSPAPFITSKCAAAGAGVMETGQERAGGGCGAGVL
VTNDRAAGAAAAGSLDRGRNQEEEEEAAAAAVVVVGGRGGGCENLDSSPLSPRYRIGLSK
KSPSVLLLPPQLTDVDSGKITGPPGTIRKATNNHVLSGASGNVESRMYSSTNSLPTAGTT
SSLRLNHSNHTGSNHTYLKNTYKKNLSEPEEELLQQFKREEVSTTGGFSAHYLSMFLLTA
ACLFFLILGFTYLRMRGSGVAEDVGANIKDPFSEELQKIQEYEISLMMKSLYALHDKLAQ
VAGEHECGSSIQRNLTVQEAAAYLKTLDPEYESVLNASLQWILNSGEDVGIKCLSNDPNE
MDVTDVTDVKYLESTSPNMSFRCRFRRAFVNVTHRLSILLWGIAMVWGVLHYMKYRWAKE
EEETKQMYDMVVKIIDVLRSHSEACSENKELQPYMPILHVRDSLIPPQDRRKMNKVWNRA
VDFLAANESRVRTETRRVGGAEFSVWKWMQPSAVCDKILVIPSKVWQGQAFHLDRRNSPP
NSLTPCLKIRNMFDPVMEIGDHWHLAIQEAILEKCSDNDGIVHIAVDKNSREGCVYVKCL
SPEYAGKAFKALHGSWFDGKLVTVKYLRLDRYHHRFPQALTCNTPLKPSNKHMNSMSHLR
LRTGTTDSQGSS
NT seq
2739 nt
NT seq
+upstream
nt +downstream
nt
atggcgatggccgcgcagctcacggacgaggagcttttctcggagctgaggcgcttcgga
ttctccccggggccggtcaccgagagcacccggcccgtctacctgaagaagctgaagaag
ctgcgcgaggatgaacgggccggggcccgcggcggcggcgccaacaagacccggaacagc
aacaataataacacgggagccggagcggcgccgggcggaggcggcggccccgggcgggcg
gccccgggagcgcggctggccggcgcagagcacccttttctccccggggctgccgccggc
ggtggccggggccgacccgcaccccccgccgggggcggcaaagtgctgctgggcttcagc
tcggacgagtcggacgtggagagcagtccccggagcccggccggcggcaggagggagcgg
gctgcgcccctcttccgcggcctcaggcccgccgccccccacagcgcctgcggcgtgagc
agcagctcccccccggaggaggcggcccggcggaagcccaacgcctggtggggggcggcg
gccaggagaccggcggcgactcagggtgtgagggagtccggggacggcgaggaggaggac
gacgaagaggaggagaaggaaagcgagcagcagcggtggaagaatcggaccgtgaacggg
aaccgactcctctcctacggtggcggcagggacaagtactcggactcggaggaggaggag
gcggcgggggcgagggccaaacagcagggaccgaaggaggagtctgcagttcgccggccc
agacggagcctcagcaagtcgcctgctccattcataacaagcaaatgcgctgcagccggc
gctggcgtgatggagacgggccaagaaagggctggcggaggctgcggtgctggtgtgctc
gtaacgaatgacagggcggcgggggcggctgctgccggcagtctagacaggggcagaaat
caggaggaggaggaggaggcggcggcggcggcggtggtggtggtgggaggaagaggagga
ggatgtgaaaatctggactctagtcctctcagccccagataccgcattggcctatccaag
aaatccccatcagtattgttgctgccaccacagctcacggacgtggacagcggcaaaatc
actggtcctccaggcaccattaggaaagcgaccaataatcatgttctcagcggtgcttct
ggtaatgttgaatccaggatgtattcatctactaatagccttcccacggctggaaccacc
tcttcccttagactcaaccactccaatcatacgggttcaaatcatacctacctgaaaaac
acctacaagaagaatctgtctgagcccgaggaggagcttctccagcagttcaaaagagag
gaggtatccaccactggaggcttcagtgcacattacctgtccatgttcctcttaactgct
gcatgcttgttctttctgatactgggattcacatacctgagaatgagaggttctggagta
gctgaggatgtgggagccaacatcaaggatccctttagtgaagaactccaaaaaatacaa
gaatatgaaataagtctcatgatgaagagcttgtatgcacttcatgataaattggcacaa
gtagcaggggaacatgaatgtggcagctctattcaaagaaaccttaccgtccaggaggca
gctgcatatttaaaaactttagatccagaatacgaaagtgtacttaatgcatcattacag
tggatcttgaatagcggggaagatgttggtataaagtgtctcagcaatgatcctaatgag
atggatgtcactgatgtgacagatgtgaagtatctggaatccactagtccaaacatgtct
ttcaggtgtcgttttcgccgtgcatttgttaatgtaactcacagattatcaatattgctt
tggggtatagcaatggtttggggagttttacactacatgaaataccgttgggcaaaagaa
gaagaagaaacaaagcagatgtatgatatggtggtgaaaatcatagatgttctaagaagc
cacagcgaggcatgttcagaaaataaagagttgcagccttacatgccaattttacatgtg
cgtgattctctaataccaccacaggacaggaggaagatgaataaagtctggaacagagca
gttgattttcttgcagcaaatgaatccagagttcgtacagagacacgaagagtaggtgga
gcagagttctcagtttggaagtggatgcaaccttccgcagtgtgtgacaaaattttagta
ataccatcaaaagtgtggcaaggccaagcatttcatctagacagaagaaattcaccacca
aacagcttgacaccatgtctaaagattcgcaatatgtttgatccagttatggaaataggt
gatcactggcatctagcaattcaagaagcaatcttggagaaatgcagtgataatgatgga
attgttcatattgccgtagacaaaaattcacgtgagggctgtgtatatgtcaagtgtctc
tccccggagtatgctggaaaggctttcaaggcattacacggctcttggtttgatggaaag
ctggtgacagtcaaatacctgcgactagatcggtatcatcatcgctttccacaggctctt
acttgtaacactccactgaagccatcaaacaaacacatgaactctatgtcacatctgcgt
cttcggacaggcacaactgattctcagggaagttcctga
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