KEGG   Cinclus cinclus (white-throated dipper): 134043630
Entry
134043630         CDS       T10813                                 
Symbol
RBX1
Name
(RefSeq) E3 ubiquitin-protein ligase RBX1 isoform X1
  KO
K03868  E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
Organism
ccic  Cinclus cinclus (white-throated dipper)
Pathway
ccic03420  Nucleotide excision repair
ccic04110  Cell cycle
ccic04114  Oocyte meiosis
ccic04120  Ubiquitin mediated proteolysis
ccic04141  Protein processing in endoplasmic reticulum
ccic04310  Wnt signaling pathway
ccic04350  TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:ccic00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    134043630 (RBX1)
   04120 Ubiquitin mediated proteolysis
    134043630 (RBX1)
  09124 Replication and repair
   03420 Nucleotide excision repair
    134043630 (RBX1)
 09130 Environmental Information Processing
  09132 Signal transduction
   04310 Wnt signaling pathway
    134043630 (RBX1)
   04350 TGF-beta signaling pathway
    134043630 (RBX1)
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    134043630 (RBX1)
   04114 Oocyte meiosis
    134043630 (RBX1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ccic04121]
    134043630 (RBX1)
   03400 DNA repair and recombination proteins [BR:ccic03400]
    134043630 (RBX1)
Enzymes [BR:ccic01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.32  cullin-RING-type E3 NEDD8 transferase
     134043630 (RBX1)
Ubiquitin system [BR:ccic04121]
 Ubiquitin ligases (E3)
  UBL E3 ligases
   134043630 (RBX1)
  Multi subunit type E3
   SCF complex
    Ring finger protein
     134043630 (RBX1)
   Cul2 complex
     134043630 (RBX1)
   Cul3 complex
     134043630 (RBX1)
   Cul4 complex
     134043630 (RBX1)
   Cul7 complex
     134043630 (RBX1)
   Cul8 complex
     134043630 (RBX1)
   Cul9 complex
     134043630 (RBX1)
DNA repair and recombination proteins [BR:ccic03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      134043630 (RBX1)
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      134043630 (RBX1)
SSDB
Motif
Pfam: zf-rbx1 zf-ANAPC11 zf-RING_2 zf-C3HC4 zf-C3HC4_2 zf-RING_11 zf-RING_16
Other DBs
NCBI-GeneID: 134043630
NCBI-ProteinID: XP_062348194
LinkDB
Position
4:59094597..59105390
AA seq 108 aa
MAAAMDVDTPSGTNSGAGKKRFEVKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQ
ASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNREWEFQKYGH
NT seq 327 nt   +upstreamnt  +downstreamnt
atggcggccgcaatggatgtggacacccccagcggaaccaacagcggcgccggcaagaag
cgcttcgaagtgaagaaatggaacgccgtagctctgtgggcatgggacattgtggttgat
aactgtgccatttgcagaaaccacattatggatctatgcatagaatgtcaagccaaccaa
gcatcggctacctctgaggagtgcacagttgcatggggtgtctgcaatcacgctttccac
ttccattgcatctctcgctggctcaaaactcgccaagtatgtccactggacaacagggaa
tgggagttccaaaagtatggacactag

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