Cinclus cinclus (white-throated dipper): 134043844
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Entry
134043844 CDS
T10813
Symbol
IRF5
Name
(RefSeq) LOW QUALITY PROTEIN: interferon regulatory factor 5
KO
K09446
interferon regulatory factor 5
Organism
ccic Cinclus cinclus (white-throated dipper)
Pathway
ccic04620
Toll-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
ccic00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
134043844 (IRF5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccic03000
]
134043844 (IRF5)
Transcription factors [BR:
ccic03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
134043844 (IRF5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IRF-3
IRF
Motif
Other DBs
NCBI-GeneID:
134043844
NCBI-ProteinID:
XP_062348563
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Position
4:complement(66597232..66601809)
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AA seq
566 aa
AA seq
DB search
MTSWATPSPRTRPFTDGRLPEAGMGRGLLSGCSHRLVTANLANQRPRGALVSPPTSGNPR
TSREREGEGVCKYTQIAMDPPRRVRLKPWLVAQVSSRRFPGLRWLDPEHRRFVIPWGHAT
RNPPGPQDHDTIFKAWAQETGRFRAGDPPDPPRWKATLRCALNKSREFRLLLDGPRGSPA
RPFRVYELCEEPPGGADGGDEDDNGCSGEEDISQLQKMTFLSIDDTRHGGDLLPCYPWPK
GDSPTFASCCPVGESFEPPPPLALLQGEAGGTHGTPELLPGTLTETGPPVGPPGASSTCP
VAPTEHLIPDLLVSPHMLPLTDLELKFQYRGRQVCVLTVSNPHGCRLFHSSLEPTQEQEE
LFGPLTLEQVPFPPPDAIPNEKQRFYTHQLLDVLDRGLILELQGQDLFALRLCQCKVFWT
GPCAAPQPGPNPIQRERRTKLFSLEGFLNGLIQFQKGQTHTPPPFEIFLCFGEEWPDQKP
KEKKLITVQVVPVAARLLLEMFSGELSWSADSIPLQISHPDLKDRMVEQFKELHQLWQSH
QRLPPAQPPPGLSAGPWALPPGPLPH
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
atgacgtcatgggccacgcccagccccagaacacgccccttcactgacgggcggttacct
gaggctgggatggggcggggcctcttgagcgggtgctcccacagattagtgacagcgaat
ttggccaatcaaaggccgcggggtgctctggtgtcaccgcccacctcggggaatccccgc
acgtcacgtgaaagggaaggggaaggtgtatgcaaatatacgcaaatagccatggacccc
ccgcggcgggtgcgcctcaagccctggctggtggcccaggtgagcagccggcgcttccca
gggctccgctggctcgaccccgagcaccggcgcttcgtcatcccctggggacacgccacc
aggaacccccctgggccccaggaccatgacaccatcttcaaggcgtgggcgcaggagacg
ggccggttccgggccggggatccgccggacccccctcgctggaaggccaccctgcgctgt
gccctcaacaagagccgcgagttccggctgctgctggatgggccccgcgggtccccggcc
aggcccttccgcgtgtacgagctctgtgaggagccccccgggggtgcagatggaggggac
gaggatgacaatggctgcagcggggaggaagatatcagccagctccagaagatgacattc
ctgagcatcgatgacacacggcatgggggagacctgctgccctgctacccctggcccaag
ggggattcccccacctttgccagctgctgccctgtgggggaatcctttgagcctcctccc
cccctggcactgctccagggggaggcagggggcacccatgggaccccggagctgctccct
ggtaccctcactgagacagggccccccgtgggccccccaggggcctcatccacctgccca
gtggcaccaacagagcacctgatccctgacctgctcgtcagcccccacatgctgccactg
actgacctggagctgaagttccagtaccggggccgccaggtctgtgtcctgaccgtcagc
aacccccacggctgccggctgttccacagcagcctggagcccacgcaggagcaggaggag
ctctttgggcccctgacactggagcaggtgcccttcccacctcccgacgccattcccaat
gagaagcagcgcttctacacccaccagctgctggatgtgctggaccgaggactcatcctg
gagctccagggccaagatctcttcgccctccgactctgtcagtgcaaggtcttctggacg
gggccctgtgccgctccccagcctggtcccaaccccatccagagggagagaaggaccaag
ctcttcagcctcgagggcttcctcaacggcctcatccagttccagaaggggcagacccac
accccgccgccctttgagatcttcctctgctttggcgaggagtggccagaccagaagccc
aaggagaagaagctgatcacggtgcaggtggtgccagtggcagcacggctactgctggag
atgttctccggggagttgtcctggtcggccgacagcatcccgctgcagatctcgcacccc
gacctcaaggacaggatggtggagcagttcaaggagctgcaccagctctggcagagccac
cagcggctgccgccggcgcagcccccacctggcctctctgcagggccctgggcattgcca
cccggccccctgccccactga
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