Cinclus cinclus (white-throated dipper): 134046118
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Entry
134046118 CDS
T10813
Symbol
LGI1
Name
(RefSeq) leucine-rich glioma-inactivated protein 1 isoform X1
KO
K25428
leucine-rich repeat LGI family member 1
Organism
ccic Cinclus cinclus (white-throated dipper)
Brite
KEGG Orthology (KO) [BR:
ccic00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99995 Signaling proteins
134046118 (LGI1)
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Gene cluster
GFIT
Motif
Pfam:
EPTP
LRR_8
LRR_4
LRR_5
LRR_9
LRR_14
LRRCT
DUF7448
VWC2L_1st
Motif
Other DBs
NCBI-GeneID:
134046118
NCBI-ProteinID:
XP_062352362
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Position
7:15992523..16004252
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AA seq
544 aa
AA seq
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MGNASRPFRRIAYFLCLLSVLLLTEGKKPVKPKCPAWCTCTKDNALCENARSIPRSVPPD
VISLSFVRSAFTKIPEGSFLLTPSLQLLLFTSNTFDVISDDAFMGLPHLEYLFIENNNIK
SISRNTFRGLKSLIHLSLANNNLQSLPKDIFKGLDSLTNVDLRGNAFNCDCKLKWLVEWL
GSTNATVEDIYCESPPEYKKRKINSLSPKEFDCIITEFEVYQSLPYQSLSVDTFSYMNDE
HVVIAQPFTGKCIFLEWDHVEVMFRNYDNITGTSTVVCKPIVIESQLYVIVAQLFGGSHI
YKRDIFANKFIKIQDIEILKIRKPNDIETFRIAEDWYFVVADSSKAGFTTVYKWNGNGFY
SHQSLHAWYRDTDVEYLEISGKPHLILSSSSQRPVIYQWNKGTNEFVKRFDIQDMEDAYA
VKHFKVKEDVYICLTRFIGDSKVMKWGGSAFLDLQRMPSRGSMVFQPLQINNYQYAILGS
DYSFTQVYYWDAEKAKFVKFQELNVQAPRSFIHVSIDKQRDFLFASSFKGTTLIYKHVIV
DLSA
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atgggaaatgccagcagaccttttagaagaattgcttatttcttatgccttttatctgtg
cttttgctgactgaagggaagaaaccagtgaagccaaaatgtcctgcctggtgtacttgt
accaaagataatgctttatgtgaaaatgccagatctattcctcgcagcgttccgcctgat
gttatctcactatcctttgtgagatctgcttttactaaaatcccagaagggagttttttg
ctcacaccatctctgcagcttctgttgtttacgtccaacacttttgatgttattagtgat
gatgctttcatgggccttcctcatctagaatatttgttcatagagaacaacaacattaag
tcaatttcaagaaatactttcagaggactgaaatctttaattcacttgagtctcgcaaat
aataatctccagtcacttccaaaagacatatttaaaggcttggattctttaacaaatgta
gatcttagaggcaatgcatttaattgtgactgcaaactgaagtggttagtggagtggctg
ggcagcaccaatgcaacagttgaagacatttactgtgaaagcccaccagaatataagaaa
cgcaaaatcaatagcctctctccaaaagagtttgattgcattattacagaatttgaagtt
taccagtccctgccataccaatctctgtcagtagatactttctcatatatgaatgacgaa
cacgtggttattgcccagccttttactggaaaatgcatctttcttgaatgggaccatgta
gaagtgatgttcaggaattacgacaacattacaggtacttcgactgttgtgtgtaaacct
atagttattgagagtcagctgtatgtcattgtcgcacagctttttggaggctcccacata
tataaaagagatatttttgctaataagtttataaaaattcaagatattgaaatccttaaa
atccgaaaacccaatgacattgaaactttcaggattgctgaagactggtattttgttgtt
gcagacagttcaaaggctggtttcaccacagtttacaagtggaatgggaatggattttat
tcccatcagtctctgcacgcctggtacagagatactgatgtggagtatcttgaaatatct
ggcaaaccacatttaattctgtcaagtagttcgcaaagacctgtaatatatcaatggaac
aaaggaacaaatgaatttgttaagcggtttgatattcaagatatggaagatgcatatgca
gtgaagcatttcaaagtgaaagaggatgtatacatttgcttaacaagatttattggggac
tctaaagtaatgaaatggggtggttcagcatttctggatttacaaaggatgccatcccga
gggtcaatggtattccaaccacttcagataaataattatcaatatgccattcttggaagt
gattattctttcactcaagtctattactgggatgcggaaaaggcaaaatttgtgaagttt
caagaattaaatgtacaggcaccgagatcgttcatacatgtctccatcgataaacaaaga
gattttctctttgcttcaagttttaagggaactacattgatttataaacatgtcatagtt
gacttaagcgcatga
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