KEGG   Cinclus cinclus (white-throated dipper): 134046389
Entry
134046389         CDS       T10813                                 
Symbol
SMNDC1
Name
(RefSeq) survival of motor neuron-related-splicing factor 30
  KO
K12839  survival of motor neuron-related-splicing factor 30
Organism
ccic  Cinclus cinclus (white-throated dipper)
Pathway
ccic03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ccic00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    134046389 (SMNDC1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ccic03041]
    134046389 (SMNDC1)
Spliceosome [BR:ccic03041]
 Complex A
  U2 snRNP components
   U2 related factors
    134046389 (SMNDC1)
 Complex B
    134046389 (SMNDC1)
 Other splicing related proteins
  Proteins involved in snRNP biogenesis
   Other proteins involved in snRNP biogenesis
    134046389 (SMNDC1)
SSDB
Motif
Pfam: SMN_Tudor TUDOR DUF2067
Other DBs
NCBI-GeneID: 134046389
NCBI-ProteinID: XP_062352788
LinkDB
Position
7:complement(10154978..10164775)
AA seq 238 aa
MSEDLAKQLASYKAQLQQVEAALSGNADNEDLLKLKKDLQEVIELTKDLLSTQPSETLAS
SDSSASALPSHSWKVGDRCMAIWSEDGQCYEAEIEEIDEENGTAAVTFAGYGNAEVTPLF
NLKPVEEGRKAKEDSGNKPMSKKEMIAQQREYKKKKALKKAQRIKELEQEREDQKVKWQQ
FNNRAYSKNKKGQVKRSIFASPESVTGKVGVGTCGIADKPMTQYQDTSKYNVRHLMPQ
NT seq 717 nt   +upstreamnt  +downstreamnt
atgtcagaagaccttgctaagcagctggccagctacaaagctcagctccagcaagtcgag
gctgccttatctggcaatgcagacaatgaggatttactgaaactgaagaaagacttacag
gaagtcatagagttaaccaaagatcttctttcaacacaaccttcggaaactcttgcaagt
tctgacagttctgcctctgccctgcccagtcactcgtggaaggttggggataggtgtatg
gccatatggagtgaggatggacagtgttacgaagctgagattgaagaaatagatgaggag
aatggaacagctgcagttacatttgctggatatggcaatgctgaagtcacacccctgttc
aacctgaagcctgtggaagagggaaggaaagcaaaagaggacagtggcaacaaacccatg
tccaaaaaagagatgatagcccagcaaagagaatataaaaagaagaaagctttgaaaaaa
gctcagagaattaaagaacttgaacaggaacgagaagaccagaaagtcaagtggcaacag
tttaacaacagagcctattctaaaaacaaaaaaggccaggtgaaaaggagtatttttgct
tcccctgagagtgtaactggcaaggttggtgttggaacatgtggaattgcagacaaacct
atgacacagtatcaagatacctctaaatataatgtcaggcatctgatgcctcagtaa

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