KEGG   Cinclus cinclus (white-throated dipper): 134046438
Entry
134046438         CDS       T10813                                 
Symbol
RET
Name
(RefSeq) proto-oncogene tyrosine-protein kinase receptor Ret
  KO
K05126  proto-oncogene tyrosine-protein kinase Ret [EC:2.7.10.1]
Organism
ccic  Cinclus cinclus (white-throated dipper)
Pathway
ccic04010  MAPK signaling pathway
ccic04020  Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:ccic00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    134046438 (RET)
   04020 Calcium signaling pathway
    134046438 (RET)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01001 Protein kinases [BR:ccic01001]
    134046438 (RET)
Enzymes [BR:ccic01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.10  Protein-tyrosine kinases
    2.7.10.1  receptor protein-tyrosine kinase
     134046438 (RET)
Protein kinases [BR:ccic01001]
 Receptor tyrosine kinases (RTK)
  RET family
   134046438 (RET)
SSDB
Motif
Pfam: PK_Tyr_Ser-Thr RET_CLD3 Pkinase RET_CLD1 RET_CLD4 RET_CRD Cadherin RIO1 Pkinase_fungal Haspin_kinase
Other DBs
NCBI-GeneID: 134046438
NCBI-ProteinID: XP_062352884
LinkDB
Position
7:24707691..24753030
AA seq 1114 aa
MEVAQSILDFSLTTIEACCITLLSPAPEEMALGLYFPRKEYLENVYIDEPAGMPLLRIHA
LKDSHEEVAHFHLCQNLIISRGRHENNWFQIKEKTGLLYLSKSLDREDFNMLSVGNWKPL
PKVMLYVHPFQDKECDSTTRTTVFLSLVNATAPACSSLTARQLCFTEMDLSFHIKENKPP
GTFHQLQLPSVHHLCQNLSISYKLLAAEGVPFRYNENSTAVRVTQRLDREERERYELIAK
CTVREGFREMQVEVPFLVNVLDEDDSPPFLPNGTDTADAVVEFSRKEGTVLSTLTVYDAD
TTPIYPLESSRKKYTGTIITDDPWISETFRVEHIFDEIHFSPNGSQVRGTRHEYKLVLNK
SISVTEHRSFQLDVLVNDTEFHGPERSVMLHFNVSILPVSIQFSNITYQFTVNRNAERFA
QIGKICIENCMKFHGVNITYKLLSPNASCYPVSILQGREDKFGSLFVNDSSALRRPECKE
IQYTVQATDKQSRKHTKTLLTVVLEGTPLKKEEDCPDSCAISKHRAECEECGGLGVLTGR
CQWRQGSGKGITTNYSTCTPSIKTCPDGICDVVEGRDPAVCPQDCTSGNIIGGHGKGTGN
LGIKSGHGICYCFPRQNCYCEKDDIKEQLCDDLCKTVITGAVVLCFVISVLVSYYCIHRY
HKNSPKPPIASAEMTFRRPAQSYPISYSSSNVRRPSLDSMENQVSVDTFKIPEDPKWEFP
RKNLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASQSELRDLLSEFNLLK
QVNHPHVIKLYGACSQDGPLYLIVEYAKYGSLRSFLRESRKVGPSYMGSDGNRNSSYLDN
PDERALTMGDLISFAWQISRGMQYLAEMKLVHRDLAARNVLVAEGRKMKISDFGLSRDVY
EEDSYVKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIAPERL
FNLLKTGYRMERPENCSEEMYNLMLRCWKQEPDKRPTFTEISKELEKMMVKSRDYLDLAA
STPSDSLLYDDGLSEEETPLVDCNNAPLPRTLPSTWIENKLYGMSYPNWPEESPVPLTRF
DGTNSVFSRYANDSVYANWMVSHSAAKFMDKFDS
NT seq 3345 nt   +upstreamnt  +downstreamnt
atggaggttgcccagtctattctggacttcagccttacaaccatagaggcctgttgtata
actctactgtctcctgctccagaagagatggccttgggtctctacttccccaggaaggag
tacttggagaatgtctacattgatgagccagcaggaatgcctctcctgcgcatccatgcc
ctgaaggattcacatgaggaagtggcccacttccatctgtgccagaatctcataatttct
cgaggaagacatgaaaataattggttccaaatcaaagaaaaaacaggacttctctacctc
agcaaaagcctggatagagaggactttaacatgctgtctgttggaaattggaagccatta
cccaaggtgatgctgtatgtccaccctttccaagacaaggaatgcgactccactacacgc
accacggtttttctctctttggtcaatgctactgcaccagcttgcagctccctgacagca
aggcagctttgcttcacagaaatggatctctcctttcacatcaaggagaataaaccacct
ggtacatttcatcagctccagttaccctcagttcatcatctgtgtcagaatctcagcatt
tcctacaaattgcttgcagctgaaggtgttccctttcggtacaacgagaactccaccgcc
gtgcgggtgacgcagcgcctggatcgggaggagagggagagatacgagctcattgccaag
tgcactgtcagagagggattcagggaaatgcaggtggaggtgcctttcctagtgaacgtg
ttagatgaagatgactctcctcccttccttcccaatggcactgatactgcagatgctgtc
gtggagttcagcaggaaagagggcactgttctttccacgctgactgtgtatgatgcagac
accacacctatttatccccttgaaagcagcagaaagaaatacacaggaaccatcattact
gacgatccctggatcagtgaaacatttcgtgtggagcacatctttgatgaaatccacttc
agcccaaatggcagccaagtgaggggaactcggcatgagtacaaactggtactgaataaa
agcatttcagtcacagagcatcgttccttccagctggatgttttggtgaatgacacagaa
tttcatggcccagaaagatcggtgatgcttcatttcaatgtctccatcctccctgtcagc
attcagttttcaaacataacttaccagttcacagtgaacagaaatgctgaacgctttgca
caaataggaaagatctgcattgaaaactgcatgaaattccatggtgtaaacatcacctac
aagttgctgtcccccaatgcgagctgctatcctgtcagcatcctgcaaggccgagaggac
aaatttgggagcctctttgtgaatgattcctctgcgctgcgcaggcctgaatgcaaggaa
atacagtacactgttcaagctacagacaagcagagcaggaaacacaccaaaaccctcctc
actgttgtcctggaagggactcctttaaaaaaagaagaggactgccctgactcttgtgct
ataagtaagcaccgtgctgaatgtgaagagtgtggtggcctgggagtgctaacaggaaga
tgccagtggagacaggggagtggcaaagggatcaccacaaactattccacgtgcacccca
agcatcaagacttgtccggatggcatctgtgatgtggtggagggcagagacccggctgtg
tgcccccaggactgcacaagtggaaacattataggtggccatgggaagggcactggaaat
cttggaattaagtcaggacatgggatttgttactgcttcccaagacagaactgttactgt
gagaaagatgatatcaaagagcaactgtgtgatgacttgtgcaagaccgtgatcacaggg
gcagtggtgctgtgctttgtcatctctgtgctggtttcttactattgcatccaccgttac
cacaagaattccccaaagccacccatcgcctccgcggaaatgacgttccggcgcccggcg
cagtcctaccccatcagctactcctccagcaatgtccgccggccttccctggactccatg
gagaaccaggtgtctgtagacaccttcaaaataccagaagatccaaagtgggaattccct
cggaagaacttggttctgggcaagactcttggagaaggagaattcggaaaggttgtcaag
gcgacagcgttccgactcaaggggagggctggctataccactgtggcagtgaaaatgtta
aaagaaaacgcttcccagagtgagctgcgagatctcctttcagagttcaaccttctgaaa
caagtcaaccatcctcatgtcatcaaactttatggagcctgcagtcaagatggcccgctg
tatttaattgtggaatacgccaaatacggctccttgcgcagtttcctcagggaaagccga
aaagtgggcccgagctacatgggcagtgatggcaacagaaattccagttatttggacaac
cctgatgagagagccttaacaatgggagacctgatatcgtttgcttggcagatctcccga
gggatgcagtaccttgcagagatgaagcttgtgcatcgggatttagcagccaggaatgtg
ctggtggcagaagggcgcaaaatgaagatttctgattttggcctctcacgtgacgtatat
gaagaagattcgtatgtaaagaggagcaagggtcgaatccctgtgaagtggatggccata
gagtcactatttgaccatatctacacaacacaaagtgatgtatggtcatttggagttctg
ctgtgggagattgttactttaggaggcaatccttacccaggtattgctcctgaaagactc
tttaacctcctaaaaacaggctatagaatggagagaccagaaaactgcagtgaggaaatg
tacaacctcatgttgcgctgttggaagcaagaacccgataaaagaccaacatttactgag
atcagcaaggaactagagaaaatgatggtgaagagtagggactacttagaccttgcagct
tccacaccctcggattccttactgtacgatgatgggctctcagaagaggagacacctctc
gtggactgtaataatgctcccctccctcgaaccctcccttccacatggattgaaaacaaa
ctctatggcatgtcatacccgaactggcctgaggagagccccgttccactcacaagattc
gatggcactaactctgtgttttcaagatatgcaaatgatagtgtatatgctaactggatg
gtttcacactcagcggcaaaatttatggacaagtttgatagctaa

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