Cinclus cinclus (white-throated dipper): 134048577
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Entry
134048577 CDS
T10813
Symbol
IARS1
Name
(RefSeq) isoleucine--tRNA ligase, cytoplasmic
KO
K01870
isoleucyl-tRNA synthetase [EC:
6.1.1.5
]
Organism
ccic Cinclus cinclus (white-throated dipper)
Pathway
ccic00970
Aminoacyl-tRNA biosynthesis
Brite
Enzymes [BR:
ccic01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.5 isoleucine---tRNA ligase
134048577 (IARS1)
Amino acid related enzymes [BR:
ccic01007
]
Aminoacyl-tRNA synthetase
Class I (U)
134048577 (IARS1)
Transfer RNA biogenesis [BR:
ccic03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
134048577 (IARS1)
Prokaryotic type
Other AARSs
134048577 (IARS1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Ubiquitin_IARS1
Anticodon_1
DUF5915
tRNA-synt_1g
tRNA-synt_1e
Motif
Other DBs
NCBI-GeneID:
134048577
NCBI-ProteinID:
XP_062356401
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All DBs
Position
12:complement(21518624..21614848)
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AA seq
1262 aa
AA seq
DB search
MVQQVPENVNFSNEEEKILTLWKNLNCFKECLKQSKNRPRFNFYDGPPFATGLPHYGHIL
AGTIKDIVTRFAHQSGFHVDRRFGWDCHGLPVEYEIDKTLGIKGPEDVAKMGIEAYNKEC
RGIVMRYAKEWEFSVTRLGRWIDFENDYKTLYPEFMESVWWVFKQLYDKGLVYRGVKVMP
FSTACSTPLSNFESHQNYKDVQDPSVTVSFPLEEDPSVSLVAWTTTPWTLPSNLALCVNP
ELQYVKLRDNATGKIYILMESRLVALYKSDSEYQILDRFPGIVLKGKKYKPLFEYFIQCK
EQGAFTVLVDGYVKEEEGTGVVHQAPYFGADDYRVCMDFNVIKKDSVPVCPVDASGCFTA
EVADFVGQYVKDADKHIIRWLKEKGRLIHSTTFQHSYPFCWRSDTPLIYKAVPSWFVRVE
HMVEKLLENNAQCYWVPDFVGEKRFGNWLKDARDWAISRNRYWGTPIPLWVSEDLEEVVC
VGSVAELEELSGVKVTDLHRESIDQLSIPSRCGKGSLRRVPEVFDCWFESGSMPYAQVHY
PFHNRRELEDAFPADFIAEGIDQTRGWFYTLLVLSTALFGKPPFKNVIVNGLVLASDGQK
MSKRKKNYPDPMHIVDSYGADALRLYLINSPVVRAENLRFKEEGVRDILKDVFLPWYNAY
RFLVQNVQILQHKDEGREFLYNENTVKESNNIMDKWILSFTQSLIQFFKAEMAAYRLYTV
VPRLVKFVDVLTNWYVRMNRRRLKGENGTEDCIMALETLFSVLFSMCRLMAPYTPFITEL
MYQNLKTLIDPASVQEKNTESIHYLMLPQVREDLIDKKIESAVSCLQSVIELGRVIRDRK
TIPVKYPLKEVVVIHQDPEALENIRSLEKYILEELNVRVLTLSADKSRYGVRLRAEPEHT
VLGRRLKGAFKPLMAAVKELSSEQLERFQETGSIVVEGHELHGEDLRLMYQMTEGSAQFE
AHSDAQVLVLLDVTPDQSMVDEGVAREVINRIQKLRKKRNLIPTDEITVYYRALPEGEYL
DTVIQHHTEFIFATVKADLKPYPVPTSKEVLIQETTQLKGSELEITLVRGGVCQSVGPTC
AYVNLKVCVNGTEQDGVLLLENPKGDNILNFTGLVDAVSCIFGLKNSKLTVFNGNTELMN
QTDLLGLSGKTLHVTAGSVPALPSSPSALLCQYINLQLINAKPQECQKGTVGTLLMENPV
GQNGLTYKGLLHETAKVFGLRSRRLKLFLDEALTHEITKDVSMKNLNMKTLYVHVIPTTA
EC
NT seq
3789 nt
NT seq
+upstream
nt +downstream
nt
atggttcaacaagttccagaaaacgtaaatttttcaaatgaggaagagaagatattgacg
ctctggaaaaatcttaattgtttcaaggaatgcctgaagcaatcaaagaacagacctagg
tttaacttctacgatggccccccatttgccacggggctcccccactatggccatattctt
gcaggaactatcaaagacatcgtgaccagatttgctcatcagagtggttttcatgttgac
agaaggtttggctgggattgccacggcctacctgtggaatatgagattgacaagactttg
ggaattaaagggccagaggatgtggcaaagatggggattgaagcttacaacaaagagtgc
agagggattgtcatgagatatgccaaggagtgggagttcagtgttaccagattaggacgc
tggattgactttgaaaatgactacaaaactctttaccctgagttcatggagtctgtgtgg
tgggttttcaagcagctctatgacaaaggactggtgtatagaggggttaaggtcatgcct
ttttcaactgcatgcagcacccctctgtccaactttgagtcccatcagaactacaaggat
gttcaggatccttcagtgactgtgagcttcccactggaggaagatccaagtgtttctctt
gttgcctggaccacgactccctggaccttgcccagcaatctggccctttgtgttaaccca
gaactgcaatatgtgaagctgagagataatgccacagggaagatttacattttgatggag
tccaggctggtggcactgtacaaatctgacagtgaatatcagatacttgacaggtttcct
ggtattgttcttaaaggcaagaaatacaaaccactctttgaatattttattcagtgcaaa
gaacaaggtgcctttactgtgctagtggatggttatgtgaaggaggaggaaggcacagga
gttgtccatcaggctccttattttggtgctgatgattacagagtctgcatggattttaat
gtcattaagaaggactctgtgcctgtgtgtcctgttgatgcatcaggctgtttcacagca
gaagtggctgactttgttgggcagtatgtgaaggatgcagataagcacatcatcagatgg
ctgaaggagaagggccggctgatccacagcaccaccttccagcacagctaccccttctgc
tggaggtcagacactccactgatctacaaagctgtgcccagctggtttgtcagggtggag
cacatggtggagaagctgctggagaataatgcccagtgctactgggttccagatttcgtg
ggggagaagcgctttgggaactggctgaaggatgcccgagactgggccatctctcggaac
cgctactggggcacccccatccctctgtgggtcagcgaggatttggaagaggtggtttgt
gttggctcagtagcagaactggaggagctgtctggagtgaaagtcacagatctgcatcga
gaaagcattgaccagctgagcatcccgtcgcgctgcgggaagggctccctgcgccgtgtg
ccggaggtgtttgactgctggttcgagagcggcagcatgccctatgcccaggtgcactac
cccttccacaacaggagggagctcgaggacgctttccctgctgacttcatcgccgagggc
atcgaccagacacgaggatggttctacactttgctggtgctgtccactgctctttttggg
aagcctcctttcaagaatgtcattgtgaacggccttgtccttgccagtgatggccaaaaa
atgagcaaaaggaagaagaattatcccgatccgatgcacattgtggacagttatggagct
gatgcactcaggttgtacctgatcaattctcctgtggtaagagcagaaaacctgaggttt
aaggaggagggagtgagggatatcctgaaggatgtgttcctgccctggtacaacgcctat
cgcttcctggtgcagaacgttcagatcctgcagcacaaggatgagggaagagaattcctt
tacaatgaaaacacagttaaggagagcaataacatcatggataaatggattctttctttc
acccagtccctcatccagttcttcaaagctgaaatggcagcttacaggctgtacacggtg
gtgcctcggctggtgaagtttgtggatgttctgaccaactggtacgtcagaatgaaccgc
aggagactcaagggtgagaatgggactgaggactgcattatggccttggaaactttgttt
agtgtcctgttctccatgtgcagactcatggcaccatatactccatttatcactgagctg
atgtaccagaatctgaaaacactcatcgatccagcctcagtccaggagaagaacactgag
agcatccactatctcatgctcccccaagtcagggaggatctcatcgacaaaaaaattgaa
agtgccgtttcttgtttgcagtctgtgattgagctgggacgagtgatcagagacagaaaa
accatcccagtcaagtatcctttgaaagaagtagtagttatccaccaggatccagaggct
ctggaaaacatcaggtctttagagaagtacatacttgaggagctgaacgtgcgggtgctg
acgctgtctgcggacaagtcccgctacggggtgcgcctgcgggccgagcccgagcacacc
gtgctgggccggcgcctcaagggcgccttcaagcccctcatggctgccgtcaaggagctc
agcagcgagcagctggagaggttccaggagacaggcagcattgttgtggaaggacacgag
ctccatggggaagatctccgactcatgtatcagatgacagagggatctgcccagttcgag
gcacactccgatgctcaggtcttggtgctgctggatgtgaccccagaccagtccatggtg
gatgaaggagttgcccgggaagtgatcaatcgcatccagaagcttcggaagaagaggaac
ctgatccccacagatgagatcacagtgtactacagggccctgccagagggggaatacctg
gacaccgtcatccagcaccacactgagttcatttttgccacagtaaaggcagatctgaag
ccttacccagtgcctacctcaaaggaagttctcatccaggaaacaacccaactgaaggga
tcagagctggaaatcacactggtcagagggggggtgtgtcagagtgttggcccaacctgt
gcctacgtcaacctcaaagtttgtgtcaatgggacagagcaagatggtgtgttgctgctg
gaaaatccaaaaggagataatatcttaaacttcactggacttgtagatgctgtctcctgc
atttttggtcttaaaaattccaaactgacagtttttaatggaaacacagagctgatgaac
cagacagacctgctgggcctcagtgggaagactctgcatgtgacagcagggtcagtccct
gccctgcccagctcccccagtgccctgctctgccagtacatcaacttgcagctgatcaat
gcaaagccacaagaatgccagaaaggaacagtgggaactctcctaatggaaaaccctgtt
ggtcagaatggattaacctacaaaggtcttctgcatgagacagcaaaagtttttgggctc
agaagcaggaggctaaagttgttcctggatgaagcactaactcatgagatcacaaaggat
gtttctatgaagaacctgaatatgaagaccctctatgttcatgtgatacccaccacagct
gaatgttga
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