Cinclus cinclus (white-throated dipper): 134048670
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Entry
134048670 CDS
T10813
Symbol
RNF123
Name
(RefSeq) E3 ubiquitin-protein ligase RNF123 isoform X1
KO
K12169
Kip1 ubiquitination-promoting complex protein 1 [EC:
2.3.2.27
]
Organism
ccic Cinclus cinclus (white-throated dipper)
Brite
KEGG Orthology (KO) [BR:
ccic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ccic04121
]
134048670 (RNF123)
Enzymes [BR:
ccic01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
134048670 (RNF123)
Ubiquitin system [BR:
ccic04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
134048670 (RNF123)
Multi subunit type E3
KPC complex
134048670 (RNF123)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_RNF123
SPRY
zf-C3HC4_3
zf-RING_2
zf-C3HC4
DUF7050
Motif
Other DBs
NCBI-GeneID:
134048670
NCBI-ProteinID:
XP_062356577
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All DBs
Position
12:complement(17132583..17177733)
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AA seq
1307 aa
AA seq
DB search
MTSRGAGTAFSRKNYRLTTEPEKSKVTGIVNSRLLNDYLHRVFTSADGNQPAAAYRKHLT
FQNLQEHLERLLAEENGSEESRDQVAEGRLGPSTVVLDHTSGFEGLLLVDDDLLGVIGHS
NFGSIRATTCVYKGKWIYEVLISSQGLMQIGWCTLNCRFNQEEGVGDTPDSYAYDGNRVR
KWNVTTTNYGKSWAAGDIVSCLIDLDEGTIAFCLNGISLGTAFDNITRGAGMAYFPAISL
SFKESVAFNFGSRPLRYPVEGYRPLQDPPVADLVKAQKLLGYLKNVIHTGIDVTEGKLVE
KDTSMWQLQGEPTVLITLAHIFNYFSPLMCKVYLVEDVLMTFLLSILEQGGAVEAHPLIQ
QLLDLMWLLMEEYEVHECLKQLLMSLLRAYRFSPIIPDLGLQIHYLRLTIAVLKHEKSRK
YLLSNVLFDVLRSVVFFYIKSPLRVEEAGLQELIPTTWWPNRFTKEGKESKEVKEENAER
LRRRAYERGCQRLKKRIEVVEGLQVQILKLLLNNKDRGGGEASRYIFLNKFRKFLQENAS
NRGNLAVLCPPEYMVCFLHRLIAALRYFWDGHKAKTPTALSSEEAYVPPQLFYNGKVDYF
DLQRLGGLLSHLKKTLKDDLAAKANILIDPAELQAVTMDDLDEDEESATSAAQSQRPSAA
LAIGGALARPAWLSSPTLGRANRFLSTAAVSLMNPRRPLGTLEKIKVLTLRVEQRTREDI
EGTHGNEGLSLGRPPEEPDQPITENSLLEVLDGIVMMYNLSVHQQLGKMVGVSDDVNEYA
MALKDTEEKISRCPKKRRDIHEELLKSQKVFSEKLNHLSRRLAWINVTIYSKEKMLDIYW
LLRVCIRTIEHGDRTGSLFAFMPEFYLSVAMNSYSALKNYFSPVNSMEELPGYEETLMRL
AAILAKHFADSRIVGTDIRDSLMQALASYVCYPHSLSAVERIPEEQRISMMKNLLAPYEQ
RPWAQTNWILVRLWRGCGFGYRYTRLPHLLKTKPEDASLPSLQKPCPSTLLQQHMADLLR
SDRDLAPSFLNSVLNQLNWAFSEFIGMIQEIQQAAERLERNFVDSRQLKVCATCFDLSVS
LLRVLEMTVTLAPEIFLDWNRPSSELLLRRLAQLLNQVLNRVTAERNLFDRVVNLRLPGL
ESVDHYPILVAVTGILVRLLVDTDVQGTERATAVLLADPCFQLRSIQYLLGHAEPSALAA
AAPATDKRHFSLHTYTEYINTEELAKVEKMLNHLSEESKQAAATTLPTSEEDLCPICYAH
PISAIFRPCSHKSCKACINQHLMNNKDCFFCKATITGVDDFTKPASS
NT seq
3924 nt
NT seq
+upstream
nt +downstream
nt
atgacgtcgagaggtgctgggactgctttctcaaggaagaactacaggctgaccactgag
ccagagaagtccaaggtcacagggatcgtgaacagcaggctgctgaatgattatctgcat
cgagtctttaccagtgctgatgggaaccagcctgcagctgcttacaggaagcacctgaca
ttccagaatctgcaggaacaccttgagcgattgctggcagaggagaatggctctgaagaa
agcagagatcaggtagccgagggccggctcggtccctccactgtggtgttggaccacacg
agtggctttgaggggctcctgctggttgatgatgatttacttggggtgattggccacagt
aactttgggtccatcagggccacaacgtgtgtgtataaagggaaatggatttatgaggtg
ctcatctcctcccagggactcatgcagattggctggtgtactctcaactgcagatttaat
caggaggaaggcgttggggacacgccagattcatatgcatatgatggaaacagggtgcgc
aagtggaacgtgactaccacaaactatggcaaatcctgggcagcaggggacatcgtcagc
tgtctgatagacctcgatgagggcaccattgctttctgcttgaatggcatatctctggga
actgcctttgataacatcacaaggggtgctggaatggcttatttccctgccatcagcctc
tccttcaaagagtctgtggcttttaactttggaagccgtccactccgttatccagtggag
ggttaccggcccttgcaagatcctcctgtggcagacctggtgaaggctcagaagctgttg
ggctacttgaagaatgtgatccatactggaatagatgtgacggaggggaagctggtggag
aaggacacatccatgtggcagctgcagggagaacccacagtgttgattacattagctcac
atcttcaattatttctcccctcttatgtgcaaggtgtacctggtggaagatgtgctcatg
accttcctgttgagcatccttgagcaaggaggggcagtggaggcccacccccttattcag
cagctgctggatctcatgtggcttcttatggaggagtatgaagtgcatgagtgcctcaag
cagctattgatgtccctgctacgggcttacaggttctctcccatcatcccagacctggga
ttacaaatccactacctccggctcaccattgcagtcttgaagcatgagaaatctaggaaa
tacctactcagcaatgttctctttgacgtgctccgttctgttgtgttcttctacatcaag
agccctctgcgtgtggaggaggcaggtttgcaggagctcattcccaccacgtggtggcca
aaccgcttcaccaaggagggcaaggagagtaaggaagtgaaggaggagaatgctgagaga
ttgaggcgtcgggcttatgaaagaggctgccagcggctcaagaaacgcattgaagtggtg
gaaggtctccaggttcagattctgaagttgctgctgaacaacaaggacagaggagggggg
gaagcctccagatacatcttcctaaacaaattccgcaagtttcttcaggaaaacgcaagc
aacagagggaacttggctgtgttgtgcccaccagagtacatggtgtgcttcctgcaccgg
ctcatcgctgccctgcgctacttctgggatggccacaaagcaaagaccccaactgccctg
agcagtgaagaggcctatgtccctcctcaactattctataacgggaaggtggattatttt
gaccttcagcgacttggaggtcttttgtctcatcttaagaagactctgaaagatgacctg
gctgcaaaagccaacatcctgatcgaccctgcagagcttcaggcagtgactatggatgat
cttgatgaagatgaggaatcggcaacatcagcagcacaatcccagcgcccctctgccgcc
ctggccattggtggagcccttgccaggcctgcttggctgagctcccccaccctgggccgg
gccaaccggttcctgagcacagcagccgtcagcctgatgaacccacggcggccccttggc
accctggagaagatcaaagtactcacactgcgcgtggagcagcgcacgagggaggacatt
gaaggcacccatggaaatgagggtctctcactgggcagacccccagaggaaccagaccag
cccatcactgagaactccctcctggaagtcctggatgggatagtgatgatgtacaacctc
agtgtccaccagcagcttgggaagatggttggtgtgtcagatgatgtgaatgaatatgcc
atggcactgaaagacacggaggaaaaaatcagccgctgcccaaagaagaggagagacatc
catgaggagctgctgaagagccaaaaggtcttctctgagaagctcaaccacctgagccgg
cgcctcgcttggataaatgtcaccatttattcaaaggagaagatgctggatatctactgg
ctgctgcgagtgtgcatccgcaccatcgagcatggggacaggacgggctcgctttttgct
ttcatgccagaattctacctcagcgtggctatgaacagctacagtgcactcaagaactat
ttcagccctgtcaacagcatggaggagcttccaggctatgaagagacccttatgcgcctt
gctgccatcctggccaagcattttgctgactcgaggattgtgggcacagacatccgggac
tccctgatgcaggcattggccagctacgtctgctacccccactcgctgagtgctgtagag
aggatcccagaagagcagcggatctccatgatgaagaacctcctggctccctatgagcag
cgaccctgggcacagaccaactggatccttgtcaggctgtggcggggctgtggctttggg
tacagatacacacggctcccacacctgctgaaaaccaagcctgaggatgccagcctcccc
agcctgcagaagccatgtccctccaccttgctgcagcagcacatggcagacctactccgc
agtgaccgtgacctggcccccagcttcctcaacagcgtcctgaaccagctgaactgggca
ttctctgagttcattggcatgattcaggagatccagcaggcagcagagcgcctggaaaga
aactttgtggacagccgccagctgaaggtgtgtgccacctgctttgacctgtcagtgagc
ctgctcagggtgctggaaatgactgtcacactggcaccagagatcttcctcgactggaat
cgcccatcgtcagagctgctgcttcggaggcttgcccagctcttgaaccaggtgctgaac
cgtgtgacagctgaaaggaacttgtttgacagagtggtcaacctccgtctgccagggctg
gagagcgtggaccattacccaatccttgtggctgtgacagggatacttgtccggctgctg
gtggacactgatgttcaggggacggagcgtgcgaccgcggtgctgctggcagatccctgc
ttccagctgcgctccatccagtacctgctgggccacgccgagccctcggccctggcagcg
gctgccccggccacagacaagcgccacttctccctgcacacctacacagagtacatcaat
actgaggagctggcaaaggtggaaaagatgctgaaccatctgagcgaggagtccaagcag
gcagctgctaccacactgcccaccagcgaggaagacctgtgccccatctgctacgcacac
cccatctcggccatcttcaggccctgctcccacaagtcatgcaaagcctgcatcaaccag
cacctgatgaacaacaaggactgcttcttctgtaaggccaccatcacaggggtggacgac
ttcaccaagccagccagctcgtag
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