Cinclus cinclus (white-throated dipper): 134049374
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Entry
134049374 CDS
T10813
Symbol
FBN1
Name
(RefSeq) fibrillin-1
KO
K06825
fibrillin 1
Organism
ccic Cinclus cinclus (white-throated dipper)
Pathway
ccic04350
TGF-beta signaling pathway
ccic04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ccic00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
134049374 (FBN1)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
134049374 (FBN1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
ccic00536
]
134049374 (FBN1)
Glycosaminoglycan binding proteins [BR:
ccic00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
134049374 (FBN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_CA
cEGF
hEGF
FXa_inhibition
EGF
TB
EGF_3
Plasmod_Pvs28
Fibrillin_U_N
EGF_FBN_1st
EGF_TEN
EGF_MSP1_1
EGF_Teneurin
Motif
Other DBs
NCBI-GeneID:
134049374
NCBI-ProteinID:
XP_062357752
LinkDB
All DBs
Position
13:complement(11172858..11319051)
Genome browser
AA seq
2864 aa
AA seq
DB search
MWRGRLLGIALGVAVLWASQADAAAAGHAEGVSAKESRSSRAKRRGHGGGHDALKGPNVC
GSRYNPYCCPGWKTLPGGNQCIVPICRHSCGDGFCSRPNMCTCPNGQIAPSCGSKSIQHC
NIRCMNGGSCSDDHCLCQKGYTGTHCGQPVCENGCLNGGRCVAPNRCACTYGFTGPQCER
DYRTGPCFTLVTNQMCQGQLSGIVCTKTLCCATVGRAWGHPCEMCPAQPHPCRRGFIPNI
RTGACQDVDECQAIPGICQGGNCINTVGSFECKCPAGHKFNEVTQKCDDIDECSTIPGIC
DGGECSNTVSSYFCKCPPGFYTAPDGLKCIDVRPGFCFSTLSNGRCGNQLPQPLSKMQCC
CDSGRCWSSAPATAPEMCPIRSTDEYRKLCTVAAMLPARPDLPPARPDIIPPQLIPEVYP
PPHPEIIYPSRAPPVHPILPVNLTDYCRTFQHLCRNGRCIPTPGSYRCECNKGFQLHGRE
ECLDIDECERNPCIGGDCVNTQGSYICQCRVGYQSTATRTECRDIDECLQNGRICNNGRC
INTDGSFHCVCNAGFQVAVDGKNCEDMDECSIRNICLNGMCINEDGSFKCICKPGFQLAS
DGRYCTDINECETDGICMNGRCVNTDGSFRCECFPGLAVGLDGRVCVDTHMRSTCYGGYK
RGQCVRPLTGAVTKSECCCASTDYAFGEPCQPCPAQNSAEYQALCSSGTGMTAGGNDINE
CLLDPDLCPNGRCENLHGTYKCYCDPGYEVDSTGKNCIDIDECALNMLLCDNGQCRNTPG
SFTCTCPKGFVYTPDLKTCEDIDECESNPCVNGVCKNTPGSFVCECSPESTLDPTRTICI
ETVKGTCWQNIVNGRCEININGATLKSQCCSSLGAAWGSPCTPCERDPICQKGYSRIRGT
LCEDVNECEVFPGVCTNGQCVNTLGSFVCQCPNGMTLDASGRTCLDIRLESCYLQHEDEQ
CTSQIPGRHRMDACCCSVGAAWGYECEECPLRGTPEFEALCPRGPGFSTKIEISGKPFSK
DINECKMFPSLCTHGKCRNTIGSFKCRCDSGFALDSEERNCTDIDECRISPDLCGQGICV
NTPGDFECECFEGYESGFMMMKNCMDIDECQRNPLLCRGGTCINTEGSFRCDCPPGHQIS
PNISACVDINECELSTNLCRNGRCVNLIGKYQCACNPGYQSTPDKLYCIDIDECKIMNGG
CEDFCTNSEGSYECSCKQGFALMPDHRTCTDIDECEDNPNICDGGQCTNIPGEYRCLCYD
GFMASEDMKTCIDVNECDLHPNICLSGTCENTKGSFICHCDMGYSGKKGTTGCTDINECE
IGAHNCDRHAICTNTAGSFKCSCSPGWIGDGIKCTDLDECSNGTHMCSPHADCKNTMGSY
RCLCKEGYTGDGFTCTDLDECSENLNLCENGQCLNAPGGYRCECDMGFLPSVDGKACEDI
DECSLPNICVYGTCHNLPGLFRCECEVGYELDRSGGNCTDVNECADPTTCISGTCINTAG
SYTCECPPDFELNPTRVGCVDTRSGNCYLDIKTRGDNGGTFCSNEIGVGVSKASCCCSLG
KAWGVPCEHCPLVNTTEYKVLCPGGEGFRPNPITVILEDIDECQELPGLCQGGKCINTFG
SFQCQCPSGYYLNEETRVCDDVNECETPGICGPGTCYNTVGNYTCICPPDYMQVNGGNNC
MDMRRSLCYRNYYADNQTCDGELLFNMTKKMCCCSYNIGRAWNKPCEQCPIPSTDEFSTL
CGSQRPGFFIDIYTGLPVDIDECREIPGVCENGICINMVGSFRCECPVGFFYNDKLLICE
DIDECQNGPVCQQNAECVNTAGSYRCDCKPGYRFTSTGRCTDRNECQEIPNICSHGQCID
TVGSFYCICHNGFKTNDDRTMCIDINECERDACGNGTCRNTIGSFNCRCNLGFILSHNND
CIDVDECASGNGMLCRNGQCVNTIGSFQCLCNDGYEVALDGRTCVDINECALEPGKCSPG
TCQNLDGSFRCICPPGYILQNDKCEDIDECVEQPEICALGTCSNTPGSFKCLCPEGFVLS
STGRRCQDLRVSYCFTKFEDGKCSVPKSRNHSKQECCCALKGQGWGDPCELCPEEADEAF
RQICPFGIGILVGPGDARLDVDECLDPDNCKFGQCINTDGSFRCECPYGYILQGAECVDT
DECAVGNPCGNGTCRNVIGGFECTCVEGFEPGPMMTCEDVNECIQNPLLCAFRCVNTFGS
YECKCPGGYVLREDRRMCRDQNECEEGIHDCDSKQMECKNLIGTYMCICGPGYQRRPDGE
GCIDENECQTKPGLCENGRCVNTVGSYKCECNEGFTVTDTQDECLDNREGYCFTEVLQSM
CQIGSSNRNAVTKSECCCDGGRGWGQNCEVCPFPGTVAFKKLCPHGRGYTSSGADIDECK
VIHDVCRNGECINERGTYHCLCNPGYTTDVTGTLCIDLNECNESPKPCNFICKNTEGSYQ
CSCPKGYILQEDGRSCKDLDECATKQHNCQFLCVNTIGGFTCKCPPGFTQHHTACIDNNE
CATEINLCGAKGICQNTPGSFVCECQRGFSLDQTGQSCEDVDECDGNHRCQHGCQNIIGG
YRCSCPQGYLQHYQWNQCVDENECLSAHICGGASCHNTLGSYKCMCPTGFQYEQFSGGCQ
DINECGSSQAPCSYGCSNTEGGYVCGCPPGYFRIGQGHCVSGVGLGRGQGQELSLSGEVD
DNSLSPEACYECKINGYPKRGRKRRSANETANEAEDPHELEPPISLASWDIEKAAVFSIN
ISDLSNKDRILELLPALTTLTNHNRYLIDSGNEDGFFRINKKDGISYLHFTKKKPVPGNY
SLQISSIPLYKKKELYQLEAKHDKDYLSGELGDNLKMKIQILLH
NT seq
8595 nt
NT seq
+upstream
nt +downstream
nt
atgtggcgggggcggctgctggggatcgccctgggagttgccgtgctgtgggcgtcccag
gctgatgccgccgccgccgggcacgccgagggggtgagcgccaaggagagccggtccagc
cgggccaagaggcgagggcacggcggcgggcacgacgcgctcaaaggaccaaatgtgtgt
ggatcacgttacaatccctactgctgccctggatggaaaacattacctggtggaaaccaa
tgcatagtcccaatctgcagacattcctgtggggatggattttgctctagaccaaacatg
tgcacatgcccaaatggtcagatagccccctcctgtggttcaaaatcaatccaacactgt
aacatccggtgcatgaatggaggtagctgcagtgatgaccattgcctctgtcagaaggga
tatacaggaacacactgtggacagcctgtctgtgaaaatggatgtctaaatggagggaga
tgcgtagctccgaaccgatgtgcttgcacatatggcttcactggaccccagtgtgagaga
gattacaggaccggcccttgcttcactttggtaaccaaccagatgtgccagggccagctc
agtgggattgtctgcacaaaaaccttgtgctgtgcaactgttgggagagcgtggggccat
ccctgtgaaatgtgtcctgcccagccgcatccctgccgccgaggcttcattccaaacatc
cgaacgggcgcctgtcaagatgtggatgaatgccaagccatccctgggatctgtcaaggg
ggaaattgcattaataccgttggatcttttgagtgcaaatgcccagctggacacaagttt
aatgaagtaacacaaaaatgtgatgatatcgatgaatgtagcaccattcctggaatttgt
gatggaggagagtgttcaaacacagttagcagttacttctgcaagtgtcctccagggttt
tatacagctcctgatggcttaaaatgcatagacgtgcgccctggattctgcttctccacg
ctgagcaacgggcgctgtggcaatcagctgccacagcccctgtccaagatgcagtgctgc
tgtgacagcggccgctgctggtcttctgctcctgccactgctccagaaatgtgccccatc
agatccactgacgagtatcgtaaattgtgcacagtagctgctatgctgccagcaagacct
gaccttcctccggcccgtcctgacatcatccctccacaactcattcctgaagtttaccct
cctccacatccagaaatcatctatccatctcgggctccaccagttcatccgatcttgccg
gtgaacttaactgactattgccgaacattccaacatctctgccgtaatggacgttgtatt
cccactcctgggagctaccgctgcgagtgcaacaaaggattccaactgcatggtagagag
gaatgccttgatattgatgaatgtgaaaggaatccatgcattgggggagactgtgtgaac
acccaaggatcctacatctgccagtgtcgtgttgggtatcagagcacggcgaccagaaca
gagtgccgagacatcgatgaatgcttacagaatggtcgtatctgtaataatggacgatgc
ataaatacagatggcagttttcactgtgtgtgtaatgctggctttcaagtggcagttgat
gggaaaaactgtgaagatatggatgaatgcagcatcaggaacatttgcctcaatgggatg
tgcatcaatgaagatggcagttttaaatgcatttgtaaaccagggttccagttagcatct
gatggacgttattgcacagacatcaatgagtgtgagacagatggaatatgcatgaacggg
cgctgtgtgaacactgatggctctttcagatgtgaatgcttccctggtcttgcagtagga
ctggatggacgtgtctgtgttgatacacatatgcgaagcacatgctatggtggctacaag
agaggacaatgtgtgagaccattaacaggtgcagttacaaagtcagaatgctgctgtgcc
agcactgactacgcctttggagagccttgccagccctgcccagcacagaactcagctgaa
tatcaggctctgtgtagcagtggaactggcatgactgctggaggaaatgatattaatgag
tgcttattggatcctgatctctgtccaaatggaaggtgtgagaatctgcatgggacatac
aaatgttattgtgaccctggatatgaagtagactcaactgggaaaaactgcattgatatt
gatgaatgcgcactgaacatgctgctttgtgacaatgggcaatgcagaaatacccctgga
agtttcacctgcacctgtccaaaaggatttgtatacactcctgatctaaaaacttgtgaa
gatattgatgaatgtgaatctaacccctgtgttaacggagtgtgcaaaaacacaccaggt
tcttttgtttgtgaatgttctcctgaaagcacgttggatccaaccagaaccatctgcata
gaaactgtcaagggtacctgttggcagaacatagtcaatggaagatgtgaaataaatatc
aatggagcaactctgaagtcccagtgctgttcctcactgggtgctgcttggggaagccca
tgtacaccatgtgaacgagacccaatatgtcaaaagggatattcaagaataagaggaaca
ttgtgtgaagatgttaatgaatgtgaggtgtttcctggagtctgtacaaatgggcagtgt
gtcaataccttgggatcatttgtttgccagtgccccaatggaatgactttagatgcctct
ggacggacttgtcttgacattcgcctggagagttgctacctgcagcacgaggacgagcag
tgcacgtcccagatcccaggccggcaccgcatggacgcttgctgctgctccgtgggggca
gcctggggctacgagtgcgaggagtgtcctctcaggggaactcctgagtttgaagctctt
tgcccgaggggacctgggttctctacgaagatagagataagtgggaagcctttctctaaa
gacatcaatgaatgcaaaatgttccccagcctttgtacccatggaaaatgcagaaatacc
attggcagttttaagtgtagatgtgacagtggatttgccctcgattctgaagagaggaac
tgcacagatattgatgaatgccgcatctctcctgatctttgtggccaaggcatctgtgtc
aatactcctggagactttgagtgtgaatgttttgaaggctatgaaagtggatttatgatg
atgaaaaactgcatggacatcgacgagtgtcagcgcaatccccttctctgccgaggtggc
acttgcatcaacacagagggaagttttcggtgtgattgtcctccaggccatcagatatca
ccaaatatctctgcatgtgtagacattaatgaatgtgagctgagcaccaacctgtgccga
aacggccgttgtgtcaacctgattggaaagtatcagtgtgcttgcaaccctggatatcag
tccacaccagacaagctgtactgtatcgatattgacgagtgcaaaataatgaatggtggc
tgtgaggacttctgtacaaactcagagggcagctatgaatgtagctgtaaacaaggcttt
gcactcatgccagaccacagaacatgcactgacattgatgagtgtgaggacaatcctaac
atctgtgatggaggccagtgcacaaacattccaggagaatacaggtgtctttgctatgat
ggattcatggcatctgaagacatgaagacttgcatagatgttaatgagtgtgatctgcat
ccaaacatctgtctgagtggaacctgcgagaatacaaaaggctcatttatctgtcactgt
gatatgggatattcaggcaagaaaggcacaactggttgcacagatatcaatgagtgtgaa
attggagcccataactgtgacagacatgccatatgtacaaacacagcaggaagcttcaaa
tgtagctgcagccctggctggattggagatggtatcaagtgcacagatctggatgagtgc
tccaatggaacccacatgtgcagcccacatgctgactgcaagaatacaatgggctcttac
cgctgtctgtgtaaagaaggttacactggggatggtttcacttgcacagaccttgatgaa
tgctcagaaaacttgaatctctgtgaaaatgggcagtgcctcaatgcccctggagggtat
cgctgcgaatgtgatatgggatttttgccaagtgtagatgggaaagcatgtgaagatatt
gatgagtgctcacttcctaacatctgtgtctatggaacttgtcataacctccctggactc
ttccgatgtgagtgtgaagtgggctacgagttggacagaagtggtggtaactgcacagat
gttaatgaatgtgcagatcctacaacctgcattagtggcacatgtatcaatactgctggt
agttacacctgtgagtgccctcctgatttcgagctgaatcccacccgagttggatgtgtt
gatacacgatctggcaactgttacctggacatcaaaactcggggagataatggtggcacc
ttctgcagcaatgagattggagtgggtgtttccaaggcctcctgctgctgctccctgggc
aaagcctggggagttccctgtgagcactgcccactggtgaacacaactgaatataaggtt
ctttgccctggaggggaaggattccgaccaaaccctattacagttatattagaagatatt
gatgaatgccaagaactgcctggactttgccaaggaggaaaatgtattaacacatttggt
agcttccagtgccagtgtccatcaggatactacttgaatgaagagactcgagtgtgtgat
gatgtgaatgagtgtgagacacctggcatttgtgggcctggcacgtgttacaatactgtt
gggaactacacctgcatctgccctcctgattacatgcaagtcaatggaggaaataactgc
atggatatgagaagaagtctgtgttacagaaattactatgctgacaatcaaacctgtgat
ggtgagctgctcttcaatatgaccaagaaaatgtgctgctgttcctacaacattggacgt
gcatggaataagccttgtgaacagtgtcctatcccaagcacagatgaattctccacactc
tgtggaagtcaaaggcctggcttcttcatcgacatttatacaggattaccagttgatatt
gatgaatgcagagaaattcctggagtgtgtgaaaatgggatctgtataaacatggttggc
agcttccgatgcgagtgtcctgtgggtttcttctacaatgacaagctcctgatctgcgaa
gatattgatgaatgccagaatggaccagtttgccagcaaaatgcagagtgtgtgaacaca
gctgggagctaccgctgtgactgcaaacctggctacaggttcacatccacggggcgctgc
actgatcggaatgaatgtcaagaaattcccaatatctgcagccatggccagtgtattgac
actgttggaagtttctactgcatttgtcacaatggattcaaaactaatgatgacaggaca
atgtgtatagatattaatgagtgcgagagagacgcgtgcggcaacggaacctgcaggaac
accattggctccttcaactgccgctgcaacctgggcttcatcctctcacacaacaatgac
tgcatagatgtggatgagtgtgcgagtggtaatggaatgctctgcagaaatggtcagtgt
gtgaacaccattgggtcgttccagtgtctctgcaatgatggctatgaggtggctctggat
ggaaggacttgtgttgatatcaatgagtgtgcactggagcctggaaaatgctcaccaggc
acatgtcagaacctggatggctcattcagatgtatctgtcctcctggatacatcctgcag
aatgacaaatgtgaagacattgatgagtgtgtggaacagccagaaatttgtgccctgggc
acatgcagcaacactccaggcagtttcaaatgtctgtgtccagaaggctttgtattgtct
tccacaggaaggcgatgccaagatctgagagtgagctactgctttaccaagtttgaagat
ggaaagtgttctgtgccgaagtcccgaaaccactccaaacaagagtgttgctgtgcctta
aaggggcagggatggggagatccatgtgagctctgcccagaggaagcagatgaggcattc
agacagatttgtccatttggaattggcatccttgttggacctggtgacgcaaggctggat
gtggatgagtgccttgatcctgataactgtaaatttgggcagtgtatcaacacagatggg
tctttccgctgtgaatgtccgtatggttacatcctacaaggagcagaatgtgtggatact
gatgaatgtgctgttggaaacccatgtggaaatggaacatgcaggaatgtgataggaggc
tttgaatgcacctgtgtagaaggatttgagcctgggccaatgatgacctgtgaagatgtc
aatgagtgcattcagaaccctctgctctgcgccttccgctgcgtgaacacttttggatcc
tacgagtgcaagtgccccggggggtacgttctgcgggaggaccggagaatgtgcagagat
cagaatgaatgtgaagaaggaattcatgactgtgactcaaaacagatggaatgcaaaaac
ctaattggcacctacatgtgtatctgtgggcctggttatcagcgcagaccagatggagaa
ggctgtatagatgagaatgaatgtcagaccaaacctgggctctgtgagaacggccgctgt
gtgaacaccgtggggagttacaagtgtgagtgcaacgagggattcacggtcactgacacc
caggatgagtgcctcgacaacagggagggctactgcttcactgaagtcttacaaagtatg
tgccaaatcggatcgagcaacaggaatgccgtcaccaagtcggaatgctgctgtgatggt
ggccgaggctgggggcagaactgtgaggtctgtcccttcccaggcaccgtggccttcaag
aagctttgccctcatggccgaggatacacatccagtggagcagatattgatgagtgcaag
gttattcatgatgtctgccgcaatggggagtgcatcaatgagaggggaacttatcactgc
ctttgcaatccgggctatactacagatgtcactggcaccctttgcattgatctgaatgaa
tgcaatgagtctccaaaaccttgcaatttcatctgcaaaaacacagaggggagctaccag
tgttcatgtccaaaaggatatatcctgcaagaagatgggagaagctgcaaagatcttgat
gaatgtgcaacaaagcagcacaactgccagttcctttgtgtcaacactattgggggattc
acttgcaaatgtcctcctggattcactcagcaccatacagcctgcattgacaacaatgag
tgtgctactgagatcaatctttgtggggcaaagggcatttgccagaatacaccaggaagt
tttgtttgtgagtgccaacgtggcttctcacttgatcaaactgggcagagctgtgaagat
gttgatgaatgtgatggcaaccaccggtgtcagcatggctgccaaaatataattggagga
tacaggtgcagctgcccacaaggatatctccagcattaccagtggaaccaatgtgttgat
gaaaatgaatgtctcagtgcacacatttgtggaggagcatcctgccacaatactttggga
agctataaatgtatgtgccctactggatttcagtatgagcagtttagtggaggttgccaa
gatatcaatgaatgcggttcttcacaagccccatgcagttatggttgttcaaacactgaa
ggtggctatgtctgtggatgtccacctggttacttcagaataggacaaggacactgtgtt
tctggagtggggctaggcagaggtcaaggacaagagctttcactcagtggagaagtagat
gacaactccctctctccagaagcctgttatgaatgtaaaatcaatggctatcccaagaga
ggaaggaagcgcaggagtgctaatgaaactgcaaatgaagcagaggacccacatgagctg
gagccaccaatcagccttgccagctgggacattgagaaagcagcagtcttctccatcaac
atctcagatctcagtaacaaagatcgcatcctggaactgctccctgccctcaccacactg
acaaatcataaccgatacttaattgactccggaaatgaagatggcttctttagaatcaat
aagaaggacgggataagttaccttcatttcacaaagaagaagccagtgcctggaaattac
tcattacaaatcagtagtattccactctataaaaagaaggaactttaccagcttgaagca
aaacatgacaaagactacctcagtggtgagctgggagataacctgaaaatgaaaattcag
atattgcttcattaa
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integrated database retrieval system
