Cinclus cinclus (white-throated dipper): 134050085
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Entry
134050085 CDS
T10813
Symbol
CD40LG
Name
(RefSeq) CD40 ligand
KO
K03161
tumor necrosis factor ligand superfamily member 5
Organism
ccic Cinclus cinclus (white-throated dipper)
Pathway
ccic04060
Cytokine-cytokine receptor interaction
ccic04514
Cell adhesion molecules
ccic04672
Intestinal immune network for IgA production
Brite
KEGG Orthology (KO) [BR:
ccic00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
134050085 (CD40LG)
04514 Cell adhesion molecules
134050085 (CD40LG)
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
134050085 (CD40LG)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
ccic04052
]
134050085 (CD40LG)
04090 CD molecules [BR:
ccic04090
]
134050085 (CD40LG)
Cytokines and neuropeptides [BR:
ccic04052
]
Cytokines
Tumor necrosis fators
134050085 (CD40LG)
CD molecules [BR:
ccic04090
]
Proteins
134050085 (CD40LG)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNF
Orthopox_A36R
DUF2244
Motif
Other DBs
NCBI-GeneID:
134050085
NCBI-ProteinID:
XP_062358918
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Position
15:complement(19613681..19619613)
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AA seq
274 aa
AA seq
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MNEPYGPEAPRPISSTPLGIMKMFMVFLTVFIVVQTIGTVLFCLYLHMKMDKMEEVLSLN
EDYIFLKKVQKCQTAEGQKSTLLDCEKIVKGFQNIQCKDRPLKEQPKFEMQRGPEHHEHP
RLTHENVTSVAAEKREPIAVHLAGQQSTKAGSVLEWKETMYGPTNGLISNKEGKLKVEEA
GLYYIYSQVSFCTREVSLAPFTIYIYLHIPKEEDRLLLKGQKTQSTLKSLCELQSIRVGG
IFNLREDDMVFVNVTDSTKVKYSHGNTYFGMFKL
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atgaatgaaccctatggccctgaggcaccccgtcccatcagcagcacacctcttggcatc
atgaaaatgttcatggtcttcctcactgtatttattgtagtgcagaccattggaaccgtg
ctcttctgtttgtatcttcacatgaagatggataagatggaagaagtgttgagcttaaat
gaagattacatcttcctgaagaaagtacagaaatgtcagacagcagaaggtcagaagtcg
acattattggactgtgaaaagattgtaaagggcttccagaacatccagtgtaaggacaga
cccctcaaggagcagccaaagtttgaaatgcagagaggtcctgagcaccatgagcatccc
cgtttgacacacgagaatgtgacatctgtggcagcagagaagagggagccaattgcagtt
catctggcaggtcagcagagcaccaaggcaggctcagtgttggagtggaaggagaccatg
tatggccccacaaacggcttgatatccaacaaggaggggaaactgaaggtggaggaagca
ggactctactacatctactcccaggtcagcttctgcaccagggaagtgtctttggcaccc
ttcaccatctatatttatttgcatatccccaaggaagaggaccggctcttgctgaaagga
caaaagacacagagcaccttgaagtccctctgtgagctccagtccatccgtgtgggaggc
atcttcaacctccgggaagatgacatggtctttgtcaatgtaacagactccacgaaagtg
aagtacagccatggcaacacctactttggcatgttcaagctgtag
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