Cinclus cinclus (white-throated dipper): 134050522
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Entry
134050522 CDS
T10813
Symbol
SMCR8
Name
(RefSeq) guanine nucleotide exchange protein SMCR8
KO
K23611
guanine nucleotide exchange protein SMCR8
Organism
ccic Cinclus cinclus (white-throated dipper)
Pathway
ccic04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
ccic00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
134050522 (SMCR8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccic04131
]
134050522 (SMCR8)
Membrane trafficking [BR:
ccic04131
]
Autophagy
Other autophagy associated proteins
Rab associated proteins
134050522 (SMCR8)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMCR8_C
Folliculin
Motif
Other DBs
NCBI-GeneID:
134050522
NCBI-ProteinID:
XP_062359639
LinkDB
All DBs
Position
16
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AA seq
929 aa
AA seq
DB search
MISAPDVVAFTREEELEDDLYREPPLPEEYSVPLFPFAGQGANPWAKVAGSKFTRDFILI
SEFSEQVGPQPLLTIPDDAKVSGTFDLNYFSLRIMSVDYQASFVGHPPGSAYPKLNFVED
SKVVLGDSKEGAFAYVHHLTLYDLEARGFVRPFCMAYISADEHKIMQQFQELSTEFSKAS
ECLKTGNRKAFANELEKKLKDLDYTRTVLHNETEQQKKANDKGYYTTQAIEKANELASVE
KSIIEHQDLLRQIRSYPYRKLKDSEFHPYEPECALERAEVGSDQDPAASEPGETHLYTHV
PSYTPKLIKAKSAKCFDKKLKTLEELCDVYFFTQTLDQLHHIERTFRGDVCYLLTEQISR
ALLKQQNVTNFLFEDVSFLDEKPPEKQYRGCQGLGQGAIDEKCLEESLAPKVVISLGSYK
SSVECVPIKMEQEMEDSEEPKMSESVMSEHQENLDYLDADIKGSISSGESIEVLGTEKSG
SGLTKSESQASLPVIPSPQAGRSKVGSRRTVSEDSIEVLSTCPSESLIPEDFKASYPSAI
NEEPYVDDDEGGLRFTPRLNPGIDDEQDDISKQESLVQVDAACCIGKESPNFLEPLAELG
QKPYEEDGVVRIPPQPYRPAEPGLHGGFPSHEGLSGGLLPYELDSRYPTGSREVSKSSLD
ECSDSTSYISSAASTCSDRTPSPAHLGCAAGERHRKRAGQNALRFIRQYPFAHPAIYSLL
SGRTLVVLGEDEIMVKKLVTALSIFVPNCGVYAKPVKHWVTSALHLVDFQKWKLIGLQRA
ASPAGVNVLHALSRYSRYLSILDADSKTLRCPLYKGTVVARLADHRTQIKRGSTYYMHVQ
SILTQLCSKAFLFTFCHHLHLPISEREPEESVVNRRMNFLKVQLGLVNEDIKIVQYLAEL
LKMHYIQEPGQGGSPLLRFDYVPSFLYKI
NT seq
2790 nt
NT seq
+upstream
nt +downstream
nt
atgatcagcgcccctgatgtggtggccttcaccagggaggaggagctggaggatgatctg
taccgcgagccgcccctgcccgaggagtactcggtgcctctgttccctttcgccggtcag
ggcgccaacccctgggccaaggtcgccggctccaagttcacccgggacttcatcctcatc
tccgagttctcggagcaagtggggccccagcccctcctgaccatccccgatgacgccaaa
gtgtcgggcaccttcgatctcaattatttttccctgaggatcatgtctgtggattaccag
gcatccttcgtgggacaccctccaggctctgcctacccgaagctgaactttgtggaggat
tctaaggtggtgctgggggactccaaggaaggggcctttgcctacgtgcatcacttgacc
ctgtatgacctggaagccaggggctttgtgaggcccttctgcatggcatatatttctgct
gacgagcacaaaatcatgcagcagtttcaggaactctccaccgagttctccaaagcctcc
gaatgcctgaagacggggaaccggaaagcttttgccaatgaactggaaaagaaactgaaa
gatcttgactacaccaggaccgtcctgcacaatgagactgagcaacagaagaaagccaac
gacaaggggtattacacaacccaggccattgagaaggccaacgagctggccagtgtggaa
aagtcaatcatcgagcaccaagacctgctgaggcaaattcggtcgtatccctacaggaag
ctgaaagactctgaattccacccctatgagccagagtgtgccctggagcgggctgaggtg
ggcagtgatcaggacccggctgcctctgagcccggtgaaactcacctttacacccacgtg
ccatcctacacccccaaactcatcaaagccaagtctgccaagtgctttgacaagaagctg
aagacactggaagaactctgtgatgtttattttttcacccagacccttgaccagttgcac
catattgagaggacttttcgaggtgatgtgtgttacctcctgacagagcagatcagccgg
gctctgctaaagcagcagaatgtcaccaacttcctctttgaggatgtgtcttttctggat
gaaaaacctcctgaaaaacagtacaggggctgccaggggctcggccaaggtgccatagat
gaaaagtgtttggaagagtcccttgctcctaaagttgtcatcagcttgggctcctacaag
tccagtgtggagtgtgtgcccatcaagatggagcaggaaatggaggactctgaagaaccc
aaaatgtctgagtctgtgatgtctgagcaccaggagaatctggactatctggatgcggat
atcaaaggcagcatcagtagcggggagagcattgaggtgctgggaacggagaagtcggga
tctgggctgacaaaatcagagagccaggccagcctgcccgtcattccgagcccccaggcg
ggccggagcaaggtgggcagccggcgcacggtcagcgaggacagcatcgaggtgctcagc
acgtgtccctctgagtccctcatcccagaggatttcaaagcgagctacccaagtgccatt
aatgaggagccctacgtggatgacgacgagggaggccttcgcttcacccctagactgaac
ccgggcatcgatgacgagcaggacgacatctcaaagcaggaaagcttagtgcaggtggat
gctgcctgttgtatcgggaaggagagccccaacttcctggagcccctggccgagctgggg
cagaagccgtacgaggaggacggcgtggtgcggatcccgccgcagccataccggccggcc
gagccggggctgcacgggggcttcccctcccacgagggcctctcgggggggctcctgccc
tacgagctcgactcacgctacccgacgggcagcagggaggtgagtaagagcagcctggat
gagtgctcggactccacgagctacatcagcagcgccgcctccacgtgctccgacaggacc
ccctctcccgcccacctgggctgcgcggccggggagaggcacagaaagagggcggggcag
aacgcgctgcgcttcatccgccagtaccccttcgcccaccctgccatctactccctgctc
agtgggaggaccctggtcgtgctgggggaggacgagatcatggtcaagaagctcgtgacg
gcactctccatcttcgtgcccaactgcggcgtgtatgccaagcccgtgaagcactgggtc
acctccgctctgcacttggtggatttccagaagtggaagttgataggactccagagggca
gcgtcccctgctggggtgaacgtgctgcacgccctgagccgctacagccgctacctgagc
atcctggacgccgacagcaagaccctgcgctgccccctgtacaagggcaccgtggtggcc
cggctggccgaccaccgcacgcagatcaagcgtggcagcacctactacatgcacgtccaa
agcatcctcacccagctgtgctctaaagccttcctcttcaccttctgccatcatttgcac
cttcccatcagcgaaagggaaccggaggaatctgttgtgaatcgcaggatgaacttccta
aaggttcagctgggccttgtcaatgaagatatcaaaatcgtgcagtacttggccgagctg
ctgaagatgcactacattcaggaaccggggcagggggggagccccctgctcagatttgac
tatgttcccagctttttgtacaaaatctag
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