Cinclus cinclus (white-throated dipper): 134050589
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Entry
134050589 CDS
T10813
Symbol
PDGFA
Name
(RefSeq) platelet-derived growth factor subunit A isoform X1
KO
K04359
platelet-derived growth factor subunit A
Organism
ccic Cinclus cinclus (white-throated dipper)
Pathway
ccic04010
MAPK signaling pathway
ccic04020
Calcium signaling pathway
ccic04510
Focal adhesion
ccic04518
Integrin signaling
ccic04540
Gap junction
ccic04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
ccic00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
134050589 (PDGFA)
04020 Calcium signaling pathway
134050589 (PDGFA)
09133 Signaling molecules and interaction
04518 Integrin signaling
134050589 (PDGFA)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
134050589 (PDGFA)
04540 Gap junction
134050589 (PDGFA)
09142 Cell motility
04810 Regulation of actin cytoskeleton
134050589 (PDGFA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
ccic04052
]
134050589 (PDGFA)
00536 Glycosaminoglycan binding proteins [BR:
ccic00536
]
134050589 (PDGFA)
Cytokines and neuropeptides [BR:
ccic04052
]
Cytokines
Growth factors (RTK binding)
134050589 (PDGFA)
Glycosaminoglycan binding proteins [BR:
ccic00536
]
Heparan sulfate / Heparin
Growth factors/receptors
134050589 (PDGFA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDGF_N
PDGF
Phage_Mu_Gp27
KH_PARP14_8
Motif
Other DBs
NCBI-GeneID:
134050589
NCBI-ProteinID:
XP_062359721
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All DBs
Position
16:5797630..5823641
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AA seq
237 aa
AA seq
DB search
MRTWACVLLIGFGYLSFTFSEEAEIPQELIERLAHSEIHSIRDLQRLLEIDSVGYDDVSE
TNLRSYSVHSAKHVQENRPVPIRRKRSIEEAIPAVCKTRTVIYEIPRSQIDPTSANFLIW
PPCVEVKRCTGCCNTSSVKCQPSRIHHRSVKVAKVEYVRKKPKLKEVLVRLEEHMECTCT
SSNTNSDYREEETGETEAWRKACARSYSKAVAEPGRGLRSECSSSALNHTTIFPFQE
NT seq
714 nt
NT seq
+upstream
nt +downstream
nt
atgaggacctgggcttgcgttttgctgataggttttgggtacctgtcctttaccttctcc
gaggaggccgagatcccgcaagagctcatcgagcggctggcgcacagcgagatccacagc
atccgcgacttgcagcgcctcctggagattgactccgtaggatatgatgatgtttcagaa
acaaacttgagatcttacagtgttcattctgctaaacatgtgcaagagaaccgtcctgtg
cccattcgcagaaaaagaagcattgaggaggccatcccggcggtgtgcaagacgcggacg
gtgatctacgagatacctcggagccagatcgaccctacctcggccaacttcctgatatgg
ccgccctgcgtggaggtgaagcgctgcaccggctgctgcaacaccagcagcgtcaagtgc
cagccctcccggatacaccacaggagtgtcaaggtggcaaaagtggagtatgttagaaaa
aagccaaaattaaaagaagttctggtgagattagaagagcatatggaatgcacctgtaca
tcatcaaatactaattcagattatagagaagaagaaactggcgagaccgaggcatggaga
aaagcctgtgcaaggtcatacagcaaggctgtggcagaaccagggagaggactcagatct
gagtgctcatccagtgccctaaatcacacgaccatcttccctttccaagaatga
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