Cinclus cinclus (white-throated dipper): 134053201
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Entry
134053201 CDS
T10813
Symbol
PLEKHM1
Name
(RefSeq) pleckstrin homology domain-containing family M member 1 isoform X1
KO
K23282
pleckstrin homology domain-containing family M member 1
Organism
ccic Cinclus cinclus (white-throated dipper)
Pathway
ccic04140
Autophagy - animal
ccic05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
ccic00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
134053201 (PLEKHM1)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
134053201 (PLEKHM1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccic04131
]
134053201 (PLEKHM1)
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ccic04990
]
134053201 (PLEKHM1)
Membrane trafficking [BR:
ccic04131
]
SNARE
SNARE associated proteins
Others
134053201 (PLEKHM1)
Domain-containing proteins not elsewhere classified [BR:
ccic04990
]
Pleckstrin homology (PH) domain-containing proteins
Other PH domain-containing proteins
134053201 (PLEKHM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RH_dom
RUN
PH
Zn_ribbon_RRN7
Prok-RING_1
Motif
Other DBs
NCBI-GeneID:
134053201
NCBI-ProteinID:
XP_062364054
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All DBs
Position
24:1200127..1221276
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AA seq
1034 aa
AA seq
DB search
MHSSHLEDPKEAIQLIRKQLVNAIKALQKQYVSSDTVVTSDDSNANTLCSTLEAVFVHGL
KSKHIKAETGGKGKKSGSRGPLPQPVFWGLLKSITHRNIVSELEQLMFINTDVGRCRAWL
RLALNDSLMECYLKLLLRDRTRLHEYYQAPALLLDTEECEFLLCYLQGLSSLTFELSYKS
AVLNEWTITPLSLSGLCPMSELLEPLTFSASEPCRKASLGSISQSSGSDEIEIQAPVLPI
SKASTKIKLTSSSLSLNTTSSSQLSSSLGSDSLPTAPCARSPEHGEEPLSCDSDLGTATA
EDLDRSLQEVLSEFSKARPSPDTPEGQLLPSMLGCSPQPPPGPPVSPACPAPTHGTHQEP
PPSTDISAWTGDPVSPGHGDGDAGSRSGIPAPQDGLGRAESGGSEGSQAVYSPTAQHLLS
PLLACPKSWISEDDFYRPSPGESSRSMADTNGFRPEGDSKEPALGLISALDLEMLSVPSS
DTGKPKMSPEREQKGFSVVHRRQMGLSNPFRGLLKLGSLERRGAMGIWKEFSCELSPLEL
RLFLDHEDRICVETYSLLRCESLALTHSDGRFELVFLGKKLFLRAPSQDEAEDWLDRIRE
ALRKCRPQLEEEDWETLEYSENGGEAQPVQGDSSALQYSDMPGYSLDWTPVPEAELDAIK
EAVLYMDVDKTWVPFIFSLSLETLKCFKIRNNDKILSNSYGIETIQDILPDTSLGGPSFF
KVITSKAVLKLQAENAEEAASWRELVREVLMSYLESAEEALTLGGSLDGHSQVILKNIVK
ENGFLLQYLVAIPMEKGLDSQSFICAGCSRQIGFSFARPKLCAFSGLYYCDSCHQDEETV
IPSRLIHNWDLTKRGVCKQALKFLTQIRNQPLIDLKLVNESLYEHVERMGRILRSREQLK
LLGDYLIMCRSGALKELSKRLDHRHYLLECPHKYSVADLRQIADGVFETFLQSLLQFASH
HIYSCDLCTQRGFICQICNSSNIIFPFEFDTTTRCSECKTVFHRDCHARALSCPRCERRQ
RYQRQLEACTEPSL
NT seq
3105 nt
NT seq
+upstream
nt +downstream
nt
atgcattccagccacctcgaggaccccaaggaagcaatccagctgatcaggaagcaactg
gtgaatgccatcaaggctctacagaagcagtatgtgagctcagacaccgtggtcaccagc
gatgacagcaatgccaacacactctgcagcaccctggaagctgtgtttgtgcatgggctc
aagtcaaagcacatcaaggcagagactggggggaaagggaagaaatcagggagtcggggc
ccccttccccagccagtcttttggggcctgctgaagagcatcacacatcgaaatattgtc
tcagagctggaacaactgatgtttatcaacacggatgtgggacgctgccgggcctggctg
cggctggcactgaatgacagcctcatggagtgttacctgaaactgctgctgcgggaccgg
acccggctgcacgagtactaccaagccccagctctgctcctggacactgaggagtgcgag
tttctcctctgttacttgcagggtttatcgtccttaacctttgagctctcctacaagtca
gcagttctgaatgagtggaccattaccccactgtccctgtcgggtctgtgtcccatgtct
gagctgctggagcccctcacgttctcagcctctgaaccctgcagaaaagcatcactgggc
tccatctcccagtcctcaggatctgatgagattgagatccaagcccctgtgctgcccatc
agcaaagccagcacaaagatcaagctcacatcatcctcgctgagcctgaacaccacgagc
tcgtcccagctctcgtccagcctgggctctgacagcctccccacggcaccctgcgcccgc
agccccgagcatggcgaggagccgctgtcctgcgactccgacctgggcacggccactgcc
gaggacctggacaggtccctgcaggaggtgttgtctgagttcagcaaggccaggccaagc
ccagacactccggagggacagctgctccccagcatgctgggctgctccccccagcctccc
ccgggccccccagtatcgcctgcctgcccggcaccaacccacggaacacaccaggagcct
ccccccagcactgacatctctgcttggacaggagatcctgtgtcccctggccatggggat
ggagatgctggcagcaggtctggaattccagcccctcaggatggtctgggcagagcagag
agcggtggcagcgaggggagccaggctgtctacagccccacagcccagcacctgctctct
cccctgctggcgtgtccgaagagctggatctcagaagatgatttctacagaccttcccca
ggagagagcagcagaagcatggctgacaccaacggcttcaggccagagggggacagcaag
gagccagccctggggctcatcagtgctctggacttggagatgctctcagtgccatcctca
gacactgggaagcccaaaatgtccccggagcgggagcagaagggcttcagtgtggtgcac
cgcagacagatgggtctttccaaccctttccgtgggctgctgaagctgggcagcctggaa
cggcgaggagccatggggatttggaaggagttttcctgcgagctgtccccactggagctg
cggctcttcctggaccacgaggaccggatctgcgtggagacatactccctgctgcgctgt
gagtccctggccctgacccactctgatggacgcttcgagctggttttcctggggaaaaag
ctcttcctccgagccccttcccaggacgaggctgaggactggctggacaggatccgcgag
gcgctgcgcaagtgccggccgcagctggaggaggaggactgggagactctggagtattcc
gagaatggaggtgaagcccagcctgtccagggcgattccagtgctctccagtacagcgac
atgcctgggtacagcttggactggactccagttccagaagcagagctggatgcaatcaaa
gaagctgttctgtacatggatgtggacaaaacctgggtcccgtttattttttccctttct
ctagaaactctgaagtgctttaaaatcagaaacaatgacaaaattttaagcaacagttac
ggcatagagaccatccaggacatccttccagacacgagcctggggggaccctccttcttc
aaagtgatcacctccaaggctgtgctgaagctgcaggctgagaatgcagaagaggcagcc
tcgtggcgggagctggtccgagaggtgctcatgtcctacctggagagcgctgaggaggca
ctgaccttggggggcagcttggatgggcactcccaggtcatccttaagaacattgtgaag
gaaaatggcttcttgttgcagtacctggtggccatccctatggagaagggtctggactca
cagagcttcatctgtgcaggctgctcccgccagattggcttctccttcgccaggcccaag
ctctgtgctttctccgggctctactactgtgacagctgccaccaggacgaggagactgtg
atcccctcccgcctcatccacaactgggacctgaccaaacgaggggtgtgcaagcaggcc
ctgaagttcctgacgcagatccgaaaccagccgctgatcgatctgaagctggtcaacgag
agcctctacgagcacgtggagaggatggggcggatcctgcgcagccgggagcagctgaag
ctgctgggggattatctcatcatgtgccgcagcggcgccctgaaggagctcagcaagcgg
cttgatcacaggcattacctcctggagtgtccccacaaatacagtgtggctgatctgagg
cagatcgccgatggcgtcttcgagaccttcctgcagtcactgctgcagtttgcatcccac
cacatctacagctgcgacctgtgcacccagcggggcttcatctgccagatctgcaacagc
agcaacatcatcttcccctttgagtttgacactaccaccaggtgcagtgaatgcaaaacc
gtcttccaccgggactgccacgccagggccctgtcgtgcccgcgctgcgagcggcggcag
cggtaccagcggcagctggaggcctgcacagagcccagcctgtag
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