Cinclus cinclus (white-throated dipper): 134056538
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Entry
134056538 CDS
T10813
Symbol
C9orf72
Name
(RefSeq) guanine nucleotide exchange factor C9orf72 homolog
KO
K23609
guanine nucleotide exchange protein C9orf72
Organism
ccic Cinclus cinclus (white-throated dipper)
Pathway
ccic04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
ccic00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
134056538 (C9orf72)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccic04131
]
134056538 (C9orf72)
Membrane trafficking [BR:
ccic04131
]
Autophagy
Other autophagy associated proteins
Rab associated proteins
134056538 (C9orf72)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C9orf72-like
Motif
Other DBs
NCBI-GeneID:
134056538
NCBI-ProteinID:
XP_062369344
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Position
Z:complement(35004232..35019189)
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AA seq
481 aa
AA seq
DB search
MSALCPPPSPAVAKTEISLNGESPLLAATFAYWDNILGPRVRHIWAPKTEQVLLSDGEIT
FLANHTLNGEILRNAESGAIDVKFFVLAEKRVIIVSLIFDGNWNGDRSTYGLSIILPQSE
LGFYLPLHRVCVDRLTHIIRKGRIWMHKERQEHFQKIVLEGTERMEDQGQSIIPMLTGEV
IPVMELLSSMKSHSVPEEIDITDTVLNDDDIGDSCHEGFLLNAISSHLQTCGCSVVVGSS
AEKVNKIVRTLCLFLTPSERKCSRLCRSESSFKYESGLFVQGLLKDATGSFVLPFRQVMY
APYPTTHIDVDVNTVKQMPPCHEHIYNQRRYMRSELTAFWRANSDEEMSQDHIIHTDESF
TPDLNVFQDIVHRDTLVKAFLDQIFHLKPGLSLRSTFLAQFLLVLHRKALTLIKYIEDDT
QKGKKPFKSLRSLKIDLDLTAEGDLNIIMALAEKIKPGLHSFIFGRPFYTSVQERDMLMT
F
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgtcagctctttgtccaccaccatctcctgcagttgctaagacagagatctctttgaat
ggcgagtcaccattattagctgccacttttgcttactgggacaacattcttggcccccga
gtgcggcatatctgggctccaaagacagaacaggtacttctcagtgatggcgaaataact
tttctcgctaaccacaccctgaatggagaaatacttcggaatgcagaaagtggcgcaata
gacgtgaagttctttgttttggccgagaaaagggtaatcattgtgtcattaatcttcgat
ggaaactggaacggagacagaagcacatatggactatcaattatacttccacaaagtgag
cttggtttctacttgccacttcacagagtatgcgtggataggttaacacatattataagg
aaaggaaggatatggatgcataaggagaggcaagaacatttccagaagattgtcttggaa
ggcacagagagaatggaggatcagggtcagagcatcattccaatgctgacaggagaagtc
attcctgtaatggaactcctttcatctatgaaatcccacagtgttccagaagaaatagat
ataactgacacagtgctaaatgatgatgacattggggatagttgccatgaaggctttctc
ctcaatgcaattagttcacacctgcagacctgtggttgttcagtagtcgtaggaagcagt
gcagaaaaagttaataagattgtgaggacattgtgcctgtttctcacaccatctgagcga
aagtgttccagactctgtagaagtgaatcctctttcaaatatgagtcaggactttttgtt
caaggcttactcaaagatgcaacaggaagctttgtgttgcccttccgtcaagtaatgtat
gccccgtaccctactacacatatagatgtggatgtcaatacggtgaagcagatgccccct
tgtcatgagcacatctataaccaacgacgatacatgagatctgagctgacagcattttgg
agagctaattcagatgaagaaatgtctcaagatcatattatccacacagatgaaagtttc
acacctgatttaaatgtctttcaagatattgtgcatagagatacattagtaaaagccttc
ctggatcagatctttcacctgaagcctggcttgtctctaagaagtactttccttgcacaa
tttctgcttgtccttcataggaaagcgttaactttaataaagtacatagaggatgacacg
caaaaaggcaaaaaaccttttaagtctcttcgtagcttaaagattgatcttgacttgaca
gcagagggtgatcttaacataataatggctttggcggagaagattaaaccaggtctacac
tcctttatctttgggaggccattctacactagtgtacaagaacgtgacatgctcatgaca
ttttaa
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