Cinclus cinclus (white-throated dipper): 134056592
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Entry
134056592 CDS
T10813
Name
(RefSeq) interferon-like
KO
K05415
interferon beta
Organism
ccic Cinclus cinclus (white-throated dipper)
Pathway
ccic04060
Cytokine-cytokine receptor interaction
ccic04217
Necroptosis
ccic04620
Toll-like receptor signaling pathway
ccic04621
NOD-like receptor signaling pathway
ccic04622
RIG-I-like receptor signaling pathway
ccic04623
Cytosolic DNA-sensing pathway
ccic05164
Influenza A
ccic05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ccic00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
134056592
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
134056592
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
134056592
04621 NOD-like receptor signaling pathway
134056592
04622 RIG-I-like receptor signaling pathway
134056592
04623 Cytosolic DNA-sensing pathway
134056592
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
134056592
05168 Herpes simplex virus 1 infection
134056592
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
ccic04052
]
134056592
Cytokines and neuropeptides [BR:
ccic04052
]
Cytokines
Interferons
134056592
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Interferon
SDP_N
Motif
Other DBs
NCBI-GeneID:
134056592
NCBI-ProteinID:
XP_062369407
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All DBs
Position
Z:complement(77459595..77460176)
Genome browser
AA seq
193 aa
AA seq
DB search
MPAPTAPQPCLPHAAPALLLLLTALATTLACQQLWTHHDTFPDDALRLLQDMAPSHTQPC
HLQEPPCFPDTLLHRNLHPHQAAATALRILQHLFHTLSRSSSSQHWPSQAHNDLLNKLQH
HIHHLEQCLPDNANATTLFKGPRNPLLTINKYFRDIQLFLHAHNHSACAWDHVRLEARAS
LQHLHSLTRTMRR
NT seq
582 nt
NT seq
+upstream
nt +downstream
nt
atgcccgcgcccacagccccacagccatgcctgccgcacgcagccccggcgctcctgctc
ctcctcaccgctctcgccaccaccctcgcctgccagcagctctggacacaccacgacacc
ttccccgacgacgccctgcgcctcctccaggacatggctcccagccacacgcagccctgc
cacctccaagagccgccctgcttccccgacaccctcctgcacaggaacctccacccgcac
caagccgccgccaccgccctacgcatcctccagcacctcttccacaccctcagcaggagc
agcagcagccagcactggcccagccaggctcacaacgacctcctcaacaaactccagcac
cacatccaccacctcgagcagtgcctccccgacaacgccaacgccaccacgctcttcaaa
ggaccacgcaacccgctgctcaccatcaacaagtacttcagggacatccagctcttcctc
cacgcccacaaccacagcgcctgcgcctgggaccacgtccgcctcgaagctcgcgcctct
ctacagcacctccacagcctcacacgcaccatgcgccgctag
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