Entry |
|
Name |
|
KO |
|
Organism |
ccic Cinclus cinclus (white-throated dipper)
|
Pathway |
ccic04060 | Cytokine-cytokine receptor interaction |
ccic04620 | Toll-like receptor signaling pathway |
ccic04621 | NOD-like receptor signaling pathway |
ccic04622 | RIG-I-like receptor signaling pathway |
|
Brite |
KEGG Orthology (KO) [BR:ccic00001]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
134056604
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
134056604
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
134056604
04621 NOD-like receptor signaling pathway
134056604
04622 RIG-I-like receptor signaling pathway
134056604
04623 Cytosolic DNA-sensing pathway
134056604
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
134056604
05168 Herpes simplex virus 1 infection
134056604
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:ccic04052]
134056604
Cytokines and neuropeptides [BR:ccic04052]
Cytokines
Interferons
134056604
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
Z:complement(77478111..77478692)
|
AA seq |
193 aa
MPAPTAPQPRLPHAAPALLLLLTALATTLACQQLWTHHDTFPDDALRLLQDMAPSHTQPC
HLQEPPCFPDTLLHRNLHPHQAAATALRILQHLFHTLSRSSSSQHWPSQAHNDLLNKLQH
HIHHLEQCLPDNANATTLFKGPRNPLLTINKYFRDIQLFLHAHNHSACAWDHVRLEARAS
LQHLHSLTRTMRR |
NT seq |
582 nt +upstreamnt +downstreamnt
atgcccgcgcccacagccccacagccacgcctgccgcacgcagccccggcgctcctgctc
ctcctcaccgctctcgccaccaccctcgcctgccagcagctctggacacaccacgacacc
ttccccgacgacgccctgcgcctcctccaggacatggctcccagccacacgcagccctgc
cacctccaagagccgccctgcttccccgacaccctcctgcacaggaacctccacccgcac
caagccgccgccaccgccctacgcatcctccagcacctcttccacaccctcagcaggagc
agcagcagccagcactggcccagccaggctcacaacgacctcctcaacaaactccagcac
cacatccaccacctcgagcagtgcctccccgacaacgccaacgccaccacgctcttcaaa
ggaccacgcaacccgctgctcaccatcaacaagtacttcagggacatccagctcttcctc
cacgcccacaaccacagcgcctgcgcctgggaccacgtccgcctcgaagctcgcgcctct
ctacagcacctccacagcctcacacgcaccatgcgccgctag |