KEGG   Cinclus cinclus (white-throated dipper): 134056605
Entry
134056605         CDS       T10813                                 
Name
(RefSeq) interferon-like
  KO
K05415  interferon beta
Organism
ccic  Cinclus cinclus (white-throated dipper)
Pathway
ccic04060  Cytokine-cytokine receptor interaction
ccic04217  Necroptosis
ccic04620  Toll-like receptor signaling pathway
ccic04621  NOD-like receptor signaling pathway
ccic04622  RIG-I-like receptor signaling pathway
ccic04623  Cytosolic DNA-sensing pathway
ccic05164  Influenza A
ccic05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:ccic00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04060 Cytokine-cytokine receptor interaction
    134056605
 09140 Cellular Processes
  09143 Cell growth and death
   04217 Necroptosis
    134056605
 09150 Organismal Systems
  09151 Immune system
   04620 Toll-like receptor signaling pathway
    134056605
   04621 NOD-like receptor signaling pathway
    134056605
   04622 RIG-I-like receptor signaling pathway
    134056605
   04623 Cytosolic DNA-sensing pathway
    134056605
 09160 Human Diseases
  09172 Infectious disease: viral
   05164 Influenza A
    134056605
   05168 Herpes simplex virus 1 infection
    134056605
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04052 Cytokines and neuropeptides [BR:ccic04052]
    134056605
Cytokines and neuropeptides [BR:ccic04052]
 Cytokines
  Interferons
   134056605
SSDB
Motif
Pfam: Interferon
Other DBs
NCBI-GeneID: 134056605
NCBI-ProteinID: XP_062369424
LinkDB
Position
Z:complement(77481197..77481778)
AA seq 193 aa
MPAPTAPQPRLLHAAPALLLLLTALATTLACQQLWTHHDTFPDDALRLLQDMAPSHTQPC
HLQEPPCFPDTLLHRNLHPHQAAATALRILQHLFHTLSRSSSSQHWPSQAHNDLLNKLQH
HIHHLEQCLPDNANVTTLFKGPRNPLLTINKYFRDIQLFLHAHNHSACAWDHVRLEARAS
LQHLHSLTRTMRR
NT seq 582 nt   +upstreamnt  +downstreamnt
atgcccgcgcccacagccccacagccacgcctgctgcacgcagccccggcgctcctgctc
ctcctcaccgctctcgccaccaccctcgcctgccagcagctctggacacaccacgacacc
ttccccgacgacgccctgcgcctcctccaggacatggctcccagccacacgcagccctgc
cacctccaagagccgccctgcttccccgacaccctcctgcacaggaacctccacccgcac
caagccgccgccaccgccctacgcatcctccagcacctcttccacaccctcagcaggagc
agcagcagccagcactggcccagccaggctcacaacgacctcctcaacaaactccagcac
cacatccaccacctcgagcagtgcctccccgacaacgccaacgtcaccacgctcttcaaa
ggaccacgcaacccgctgctcaccatcaacaagtacttcagggacatccagctcttcctc
cacgcccacaaccacagcgcctgcgcctgggaccacgtccgcctcgaagctcgcgcctct
ctacagcacctccacagcctcacacgcaccatgcgccgctag

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