Cinclus cinclus (white-throated dipper): 134057934
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Entry
134057934 CDS
T10813
Name
(RefSeq) LOW QUALITY PROTEIN: cystathionine beta-synthase-like
KO
K01697
cystathionine beta-synthase [EC:
4.2.1.22
]
Organism
ccic Cinclus cinclus (white-throated dipper)
Pathway
ccic00260
Glycine, serine and threonine metabolism
ccic00270
Cysteine and methionine metabolism
ccic00670
One carbon pool by folate
ccic01100
Metabolic pathways
ccic01230
Biosynthesis of amino acids
Module
ccic_M00035
Methionine degradation
ccic_M00338
Cysteine biosynthesis, homocysteine + serine => cysteine
Brite
KEGG Orthology (KO) [BR:
ccic00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
134057934
00270 Cysteine and methionine metabolism
134057934
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
134057934
Enzymes [BR:
ccic01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.22 cystathionine beta-synthase
134057934
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Gene cluster
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Motif
Pfam:
PALP
CBS
Poxvirus_B22R_C
Motif
Other DBs
NCBI-GeneID:
134057934
NCBI-ProteinID:
XP_062370958
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Position
2:112830655..112852511
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AA seq
647 aa
AA seq
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MKKKLWDQVATSRLLMSIFRDAVGPLDKEKVFVFQGQPSPQGPNASPILPSGNHQGITAQ
TSGCCKETPTRRVKRAASRRRMEEMELSKTCPLVNGSGAGSQDSTWTHPNLPSKCTWTAT
TPASKSPHSCIPLTEEKKILPNILKKIGCTPMVRINKIGKSYGLKCELLAKCEYFNAGGS
IKDRISLRMVEDAERAGIIKPGDTLIEPTSGNTGIGLALVAALKGYRCIIVLPERMSMEK
VDILKALGVEIVRTPCTRFDAPESNIRVAWKLKSEIPNSHILDQYRNPSNPLAHYDTTAE
EILEQCEGKVHMVVIGSGTGGTITGVARKLKEKCPECKIIGVDPDGSIVALPSELNRTNT
TTVEVEGIGHDFIPTVLDRSVVDQWYKSNDRDSFLMSRRLIREEGLLCGGSSGSAMSVAV
RAAQDLKEGQRCVVILPDSVRNYMSKFVNDKWMIKNGFLNDVQEHKPWWWNIKVQKLNLS
APLILLPEVSCQKAIEILQEKGYDQAPVVAESGLILGMVTLSNTLSSVLAGNAEFSDPVT
KVTYNQFSKIGLEDSLGKLSCILENDHFAIVVHQQMQFNGNGSSFMKPMVFGVVTAMDLL
TFVSRNDKKQSSLAATPPPAGPGVPLCPNHLGKGASAPIQPIVSQNA
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagaagctgtgggaccaggttgcaacatcgaggttgttgatgtccatcttcagg
gatgctgtggggcctctggataaggagaaggtatttgtgttccagggacagcccagccct
cagggaccaaacgccagccccatcctcccgagtggaaaccaccagggaattacagcacag
acctcgggctgctgcaaagaaactcccaccaggagggtgaaacgagcagcaagcaggagg
aggatggaagaaatggaactgagtaagacgtgtcccctcgtgaatggcagtggtgcaggc
agtcaggacagcacctggacccatcccaacctgcctagtaagtgcacatggacagccaca
acacctgccagcaagtctccacactcctgcattcccttgacagaagaaaagaagatcttg
cccaatatcctcaagaaaattggctgcaccccaatggtccgaatcaacaagattgggaag
tcctatgggctcaagtgtgagctcttggcaaaatgtgagtacttcaatgcggggggcagc
ataaaggaccgcatcagcctcaggatggtggaggatgcagagagagctggcattatcaaa
ccaggagacaccctgattgaacccacttcaggaaacacaggaattgggctggcactggtg
gctgcactgaagggttaccgctgcatcatcgtcttgccagagagaatgagcatggagaag
gtcgatattctgaaggcactgggtgttgaaatcgtgaggaccccgtgcacccgctttgat
gcccccgagtccaacatccgagttgcctggaagctgaaaagcgaaatcccaaactctcac
atcctggaccagtaccgaaatccgagcaaccccctggctcattacgacaccacggctgag
gagatcctggagcagtgtgaaggcaaggtgcacatggtggtgattgggtctggcacagga
ggcaccatcacgggtgttgccaggaagctgaaggagaagtgcccggagtgcaagatcatt
ggtgtggaccctgatggctccattgttgctctgcccagtgagctgaacaggaccaacacc
acaactgtcgaggtggagggcattgggcacgacttcatccccactgtcctagacagatcg
gtggtggatcagtggtacaaaagcaatgacagagattcgttcctcatgtcccgcaggctg
atcagagaggaggggttattgtgtggtggcagctcgggcagtgccatgtccgtggctgtg
agagctgcccaggacttgaaggaaggtcagcgctgcgttgtcatcctgcccgactctgtc
cggaactacatgtccaaatttgtgaatgataagtggatgataaaaaatgggttcctaaat
gatgtccaggagcacaagccttggtggtggaacatcaaggtgcagaaactgaatctctcg
gcccctctcattctcctcccagaagtcagctgtcaaaaggcaattgagatcctccaggag
aagggatatgaccaagctcctgttgttgctgagtcagggcttattttggggatggtgacc
ctcagcaacaccctgagctccgtgctggctggaaatgcagagttctcagaccctgtcacc
aaggtcacctacaatcagttctcaaagatcggcctggaggacagcctggggaagctttcc
tgcatcctggagaatgaccactttgctattgttgtgcaccagcagatgcagttcaatgga
aatggcagctccttcatgaagccgatggtgtttggtgtggtcacagccatggacctcctg
acctttgtcagcaggaacgacaagaagcagagtagtttggctgctacccctcctcctgca
ggtccaggtgtgcccctgtgcccaaaccacctgggcaaaggagcctctgccccaatccag
ccaatcgtttcccaaaatgcctag
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