Cinclus cinclus (white-throated dipper): 134058111
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Entry
134058111 CDS
T10813
Name
(RefSeq) cystathionine beta-synthase-like protein isoform X1
KO
K01697
cystathionine beta-synthase [EC:
4.2.1.22
]
Organism
ccic Cinclus cinclus (white-throated dipper)
Pathway
ccic00260
Glycine, serine and threonine metabolism
ccic00270
Cysteine and methionine metabolism
ccic00670
One carbon pool by folate
ccic01100
Metabolic pathways
ccic01230
Biosynthesis of amino acids
Module
ccic_M00035
Methionine degradation
ccic_M00338
Cysteine biosynthesis, homocysteine + serine => cysteine
Brite
KEGG Orthology (KO) [BR:
ccic00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
134058111
00270 Cysteine and methionine metabolism
134058111
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
134058111
Enzymes [BR:
ccic01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.22 cystathionine beta-synthase
134058111
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Motif
Pfam:
PALP
CBS
DUF1414
Motif
Other DBs
NCBI-GeneID:
134058111
NCBI-ProteinID:
XP_062371183
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Position
2:112799513..112821845
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AA seq
567 aa
AA seq
DB search
MEKFVSERPIPVSKNEIPTASSLKKLDTNSCPHAPAKYFTSGGVDAENCKANEKERQWIR
PDTPSKCTWKLGKPLSASPHHHTTLPEPPKILPNILNKVGNTPMVRINKIGKQFGLKCEL
LAKCEFFNAGGSVKDRISLRMVEDAERAGILKPGDTIIEPTSGNTGIGLALAAAVKGYRC
IIVMPEKMSMEKVDVLRALGAEIVRTPTTARFDSPESHVGVAWRLKNEIPNAHILDQYRN
ASNPLTHYDTTAEEILQQCDGKVDMVVATAGTGGTITGISRKLKEKCPGCKIIGVDPEGS
ILAEPEELNKTDKTMYEVEGIGYDFVPTVLDRSTVDQWYKSNDEESFALARMMIREEGLL
CGGSSGSAMSVAVKAAKELKEGQRCVVICPDSIRNYMSKFLSDKWMIQKGFMKEEDLGNK
PWWWNISIQELSLSAPLTVLPTVTCAKTVEILREKGFDQVPVVDESGVILGMVTLGNMLS
SLLVGKVKPSDEVRKVIYKQFQQINLKDNLGKLSHILEIDHFALVVHEQIQYHTDGSSSK
RQMVFGIVTAIDLLNFVTARERERKSN
NT seq
1704 nt
NT seq
+upstream
nt +downstream
nt
atggagaagtttgtatcagaaaggcctattcctgtgtctaagaatgaaatccctactgct
tcttccctgaagaagctagatacaaactcatgccctcatgcacctgccaaatattttacc
tctggtggggtggacgctgagaactgcaaggctaatgagaaggaaaggcagtggattcgc
cctgatacacccagcaagtgcacctggaagcttgggaaacccctctctgcctccccccat
catcataccaccctgccagagcctccaaagatcctgccaaacatcctgaataaagttggg
aatacacctatggtgcggatcaacaagattgggaagcaatttgggctcaagtgtgaactc
ttggccaagtgtgagttcttcaacgccgggggcagcgtgaaggacagaatcagcctcagg
atggtggaggatgctgagagggctgggatcctgaagcctggggacaccatcatagagcca
acctctggcaacacagggatcgggctggccctggcggcggcagtgaagggttaccgctgc
atcatcgtcatgccagagaaaatgagcatggagaaggtggatgtcctgagagctctgggt
gctgagattgtgaggaccccaactacagccagatttgattctcctgaatctcatgtagga
gtggcctggaggttgaagaatgaaatccccaatgcacacatcctggaccagtaccgcaat
gccagcaaccccctgacacactatgacaccacagctgaggagatcctgcagcagtgtgat
ggaaaggtggacatggtggtggccacggctggcacaggaggtacaatcactggcatctcc
aggaagctgaaggagaagtgcccagggtgcaaaattataggtgtggatcctgaaggctcc
atccttgctgaaccagaagaactgaacaagactgacaagacaatgtatgaagtggaagga
attggatatgattttgtccccacagtgctggatagatctacagtggaccagtggtacaag
agcaatgatgaggagtcctttgccttagcacggatgatgatccgcgaggaggggctgctg
tgtggtggcagctcgggcagtgccatgtctgtggctgtgaaggcagccaaggagctgaag
gagggtcagcgctgtgttgtcatctgccctgactccatcaggaactacatgtccaagttc
ttgagtgacaaatggatgattcagaaagggttcatgaaagaagaagaccttggcaacaaa
ccttggtggtggaacatcagtattcaggagctgagcctctctgcccccctgactgtgctt
ccaactgttacctgtgccaagactgtggaaattctccgggagaagggattcgaccaggta
ccagttgttgatgaatctggggtgattctgggcatggttaccctgggtaacatgctttcc
tcactgcttgttggaaaagttaagccttctgatgaagtcaggaaagtaatctacaagcaa
tttcaacagattaacctgaaagacaacttggggaagctctctcacatcctggaaatagac
cactttgccctggtggttcatgaacaaattcaatatcacacagatggctcctccagcaag
cggcagatggtgtttggcatcgtcacagccatcgacctcctgaacttcgtgaccgcgcgg
gagcgggagaggaaatccaactaa
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