Clostridium carboxidivorans: Ccar_14540
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Entry
Ccar_14540 CDS
T03979
Name
(GenBank) DeoR faimly transcriptional regulator
KO
K18349
two-component system, OmpR family, response regulator VanR
Organism
cck
Clostridium carboxidivorans
Pathway
cck01502
Vancomycin resistance
cck02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
cck00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Ccar_14540
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
Ccar_14540
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
cck02022
]
Ccar_14540
01504 Antimicrobial resistance genes [BR:
cck01504
]
Ccar_14540
Two-component system [BR:
cck02022
]
OmpR family
VanS-VanR (VanE type vancomycin resistance)
Ccar_14540
Antimicrobial resistance genes [BR:
cck01504
]
Gene sets
Vancomycin resistance modules
Vancomycin resistance, D-Ala-D-Ser type [MD:
M00652
]
Ccar_14540
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Response_reg
Trans_reg_C
GerE
cREC_REC
Motif
Other DBs
NCBI-ProteinID:
AKN32015
UniProt:
C6PYP9
LinkDB
All DBs
Position
complement(3327023..3327721)
Genome browser
AA seq
232 aa
AA seq
DB search
MSKETILVVDDEKEIRNLIGIYLENEGYKVIKASDGCEALKVLKSQQVHLIILDIMMPNM
DGIEACIKIREHKNMPIIMLSAKGEDMDKIMGLTTGADDYITKPFNPLELLARVKSQLRR
YTKLNNAMQNINSDIIEIDDLTINVSTHEVKVGEKLINLTRREFDILELLAKNRGIVFST
EKIYERVWNEEFYQSDNTVMVHIRKIREKIEENSRKPKYIKTVWGVGYKIEN
NT seq
699 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaagaaactattcttgtggttgatgatgaaaaagagattagaaatttaatagga
atatatttagaaaatgaagggtacaaggttattaaagcttcagatggttgtgaagcttta
aaggtacttaaaagtcagcaagtacatttaattatattagatattatgatgcctaatatg
gatggaattgaagcttgtataaaaataagagaacataaaaatatgcctataataatgctt
tccgctaaaggggaggatatggacaaaataatggggcttacaacaggagcagatgattat
ataactaaaccatttaatccgttggaacttttggcaagggtaaaatcccaattaagacga
tatactaaattgaataatgcaatgcaaaatataaattcagatataattgagatagatgat
ttaactataaatgtaagtacacatgaagtaaaagtaggagaaaaactgattaatcttact
agaagggaatttgacatattagagttattagctaaaaatagggggattgtttttagtaca
gaaaaaatatatgaaagagtatggaatgaagaattttatcagtcagataatactgttatg
gttcatataagaaagataagggaaaaaattgaagaaaattcaagaaaacctaagtatata
aaaactgtatggggagttggctataaaattgagaattag
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