Clostridium carboxidivorans: Ccar_18540
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Entry
Ccar_18540 CDS
T03979
Name
(GenBank) transcriptional regulator
KO
K18349
two-component system, OmpR family, response regulator VanR
Organism
cck
Clostridium carboxidivorans
Pathway
cck01502
Vancomycin resistance
cck02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
cck00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Ccar_18540
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
Ccar_18540
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
cck02022
]
Ccar_18540
01504 Antimicrobial resistance genes [BR:
cck01504
]
Ccar_18540
Two-component system [BR:
cck02022
]
OmpR family
VanS-VanR (VanE type vancomycin resistance)
Ccar_18540
Antimicrobial resistance genes [BR:
cck01504
]
Gene sets
Vancomycin resistance modules
Vancomycin resistance, D-Ala-D-Ser type [MD:
M00652
]
Ccar_18540
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Response_reg
Trans_reg_C
PDE8A_N
GlnR_1st
GerE
Motif
Other DBs
NCBI-ProteinID:
AKN32727
UniProt:
C6PX51
LinkDB
All DBs
Position
complement(4151365..4152054)
Genome browser
AA seq
229 aa
AA seq
DB search
MEKILIVEDDEDIRDILKIYLKAESFEIWEAENGKQAFEILEDKKPDLVILDLMLPDING
LNICKSIRTKYKYPIIMITAKTADQDKIIGLTYGADDYITKPFNPLEVMARVKAQLRRYK
EYGENTKEDSTIYYKGLILDRKSRQANLNGKELKLTPTEFNLLEILLLNRGQVLSGEKLF
HLLREDEYYSKSTNTVTVHIRNLREKMEESFEHPEYIKTVWGVGYIIEA
NT seq
690 nt
NT seq
+upstream
nt +downstream
nt
atggagaaaattttgattgtggaagatgatgaagacattcgagatatattaaaaatatat
ttaaaagctgaatcctttgaaatatgggaagctgaaaatggtaagcaagcttttgaaatt
cttgaagataaaaagccggatttagttattttggatttaatgctgccggatataaatggg
ttaaacatttgtaaaagtatacgcaccaaatataagtatcctataataatgatcactgca
aagacagcagatcaagataaaataataggtcttacttatggtgcagatgattatattact
aaaccttttaatcctctagaagttatggcaagagttaaagctcagcttagacgatacaag
gagtatggagaaaacaccaaagaagatagcaccatatattataaaggtttaatcttagac
agaaaaagtagacaggctaatttaaatggcaaggagctaaagttgacacctacagaattt
aatcttcttgaaatattgctattaaatagagggcaggttttaagtggagaaaagttgttt
catttgcttagagaggatgaatactattcaaaatccacaaatacagtaacagttcatatt
agaaatttaagagaaaaaatggaggaatcttttgaacatcctgaatatataaaaactgta
tggggggtaggctatatcattgaagcgtaa
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