Corticium candelabrum: 134182285
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Entry
134182285 CDS
T11492
Name
(RefSeq) TNF receptor-associated factor 6-like
KO
K03175
TNF receptor-associated factor 6 [EC:
2.3.2.27
]
Organism
cclm Corticium candelabrum
Pathway
cclm04120
Ubiquitin mediated proteolysis
cclm04140
Autophagy - animal
cclm04144
Endocytosis
cclm04517
IgSF CAM signaling
cclm04620
Toll-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
cclm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
134182285
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
134182285
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
134182285
04140 Autophagy - animal
134182285
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
134182285
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclm04131
]
134182285
04121 Ubiquitin system [BR:
cclm04121
]
134182285
Enzymes [BR:
cclm01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
134182285
Membrane trafficking [BR:
cclm04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
134182285
Ubiquitin system [BR:
cclm04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRAF proteins
134182285
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-TRAF
zf-RING_UBOX
MATH_2
zf-C3HC4_2
zf-C3HC4
TRAF-mep_MATH
zf-C3HC4_4
zf-TRAF_2
zf-RING_2
zf-C3HC4_3
zf-RING_5
TRAF3_RING
Prok-RING_4
zf-Nse
U-box
RING_XB3-XBAT31
CEP131_CC
zf-C3HC4_IRF-2BP1_2
Sina_RING
Motif
Other DBs
NCBI-GeneID:
134182285
NCBI-ProteinID:
XP_062505664
LinkDB
All DBs
Position
7:complement(6547265..6549416)
Genome browser
AA seq
442 aa
AA seq
DB search
MAASVNDKPGGYDVSFVAPLDKEYQCPICLLALKDPVQTPCGHSFCKSCFDGVVQQQGGG
DSIRCPLDKMRIATRDVFKDTKIKRIVLALKVRCTNKEAGIASCKWKGELNYFQNHLDEC
QFAKVKCFKKCGIIMSRYQLGDHCYWDCPRTVIYCSYCEVNFERQHMTKHKSTCGKRPIN
CTLNCGANIPRDDMHGHVSESGNCPNTMMPCVFKNVGCDVTVRRREIGRHLTAEVVHHQV
KQQHMIDKQQHMIDKLIDENKKLKQKLDLHLFASSEETVMSTSGRTMIKLFVKRPRAAAD
VISSPTFRAHHTGYEAKLELYPKGSWYSDYWFGLNDCWIATLMPTKGNRDDELSWPFPFR
HTITLLDQQTHQDDIKTTVDPATIDDFSWKQYYRKPGTYFLSLARPQIQNFTKSMFQVPE
SLLLSEKYKKNDTIVMVVEVDC
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atggcagcaagtgtaaacgataaacctggtggctacgacgtatcatttgtagctccgctc
gacaaggagtaccaatgtcccatctgtcttcttgcattgaaggatccggtacagactccg
tgtggacactccttctgcaaatcttgtttcgatggagtagtgcaacagcagggaggaggt
gattcaatccggtgccctttggacaaaatgaggatagccactcgcgatgtatttaaagac
actaaaatcaaaagaatagttctcgctctcaaagttcggtgtactaacaaggaagcagga
atagcctcttgtaaatggaaaggagaattaaactactttcagaatcatcttgacgagtgc
cagtttgcaaaggtcaaatgttttaaaaaatgtggaataataatgtcacgataccaactc
ggggaccattgttattgggattgtcctcgtaccgttatatattgttcttactgcgaagtt
aacttcgaaaggcaacacatgacgaaacacaaaagtacgtgtggaaaacgtcccatcaac
tgtactttgaattgtggagcaaacataccaagagacgatatgcatggccacgtttctgaa
tcaggcaactgtcctaacactatgatgccttgtgtcttcaaaaacgttggttgtgacgtc
acggtcaggagacgggagataggtcggcatttaactgccgaagtggttcatcatcaagtc
aaacaacaacacatgatagacaaacaacaacacatgatagacaaattgatcgatgaaaac
aagaagctaaagcagaaattggatttacatctattcgcgtcatctgaagaaacagtgatg
tctacttctggtcgcacaatgataaaattgtttgttaagcgaccacgtgcagctgcagat
gttatttctagccccacatttcgtgctcatcacactggatatgaagcaaagttggagctc
tatcccaaaggatcttggtactcggactattggtttggtctaaatgattgctggatagca
acacttatgcccacaaaaggcaatcgagacgacgaactaagctggcctttcccattccgt
catacgattacactacttgatcagcagacacatcaagacgacatcaagacaacagtagat
cctgctacaattgatgatttcagttggaagcaatattatcgcaaacctggtacttacttc
ttaagtctagcaagaccacaaattcaaaatttcacaaaaagtatgtttcaagtccctgag
tctcttcttctgagtgaaaaatataagaaaaacgacaccattgttatggttgttgaagtg
gactgttag
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