Corticium candelabrum: 134195628
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Entry
134195628 CDS
T11492
Name
(RefSeq) structural maintenance of chromosomes flexible hinge domain-containing protein 1-like
KO
K23113
structural maintenance of chromosomes flexible hinge domain-containing protein 1
Organism
cclm Corticium candelabrum
Brite
KEGG Orthology (KO) [BR:
cclm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cclm03036
]
134195628
03400 DNA repair and recombination proteins [BR:
cclm03400
]
134195628
Chromosome and associated proteins [BR:
cclm03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
134195628
DNA repair and recombination proteins [BR:
cclm03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Other NHEJ factors
134195628
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMCHD1_S5
Ig_SMCHD1_6th
Ig_SMCHD1_1st
Ig_SMCHD1_8th
Ig_SMCHD1_5th
Ig_SMCHD1_2nd
Ig_SMCHD1_4th
Ig_SMCHD1_7th
SMC_hinge
HATPase_c_3
HATPase_c
zf-CCHC_5
Motif
Other DBs
NCBI-GeneID:
134195628
NCBI-ProteinID:
XP_062520666
LinkDB
All DBs
Position
20:2228099..2271899
Genome browser
AA seq
2004 aa
AA seq
DB search
MEEPVVYVYDRRTGDKPEEIVSLQGVFDFQTFRNKLVETLHFDTREEFVITNSSRQEISD
DASYENRVVQGGTLYVLHSTDQELLAPTDERIDYVPHYDTLVKSGIYEYYASEGHNPLPY
AFAELIDNALTATAKNEGERNIDLYLYLEDSPVICVFDNGRGMTSRQLNHWAIYRLSKFL
RNKGSDLNESFVQQKTPRSLNSDISYFGVGGKQAIFFIGTSCRMVSKTRHCGDVHELSMS
KEEFEVKEKERKSVFSGRIRNRRPGDASHLQTGGNEILKKLIEDEEVNREQFTAVFISEI
AEKNVQYLTKNFATWSRQLAHIYHYYLHGLHGNVADKQERPPTSFKQINITIHMKAGKDK
TMLPLRLVEDDMQTRYIRSAKSTFEFKVDVQGVGEVEGVLRYHPFEYDHETYPVSLDAEE
EFSDIEDVEDAVQPSRKARGNSAMFECFWNGRLIPYTTIDGLEFCEPSKRTTTTAPLECY
SRISGCLFTNDAFQVSTNKLTFIDLPVKLKEKSNTIIYSVVTSDGRSIRDIRKHFQHWLR
DCHEKFDKEVHFIEQTGSDRRRENVESKRRQHPWCVYQRIELDGKTYQSGDVVKTCRTNP
LVCGRVVNFWLYGRHDGDTFANTGEMEIHQEPTMLYTTAKFYPLTKLDRQTSEEEILEII
KEEQLKLPKVLEVSFPENNEVKEKGKVVCGKPVGPVQVQILNGKGETIGRLAGTVGRKLG
VEQTVTCGEKEICRHVGEYSSKWFYWFRMISELKHLGSHTMKLQAVVLDGDKQQQSLQLP
SSTINFVVTEAPATSFKIVPLEEPYKVGEPFQVQLELFDKFNNRARLPPGSEPQLSAAGV
SFSVKDGVTKGNVVTIRGVVATAKVNNTSGQTFKLKVSVATIQSEYLETKLRLIPGNPHV
LECVSAGPFLVENYKSLQMTVHVKDCSGNFITDSQVKLVCKLSGADSLPTYYADCSNGVA
TFSGESIMIKRQFTGRRSTCGLQAKISVMGNDKIPAIETKVIVQPRSSPSKIIIYHKAVG
SAAKKQLLPEQDISAPVGSTVTGLSFAVFDEANREVNINDFASNVKVNWTNKLNTESVMS
GLLPGIPVPSVVSEMKYCEVSLSGMGIESSFQIKPTVGEFSALKCIASHRQVQVKQTDDV
VITVQCTDKFGNILSKLPPGFSEQLNVSGADLDVNELKVTTSSNNQVTINGIAFNKVELV
IRELTVSFQGIKAYVTFDVVAGSPAQVKFLHYNPKEPIYVYNESRLPAALIIQLYDKFGN
VSPEENVKIALGKTAGLKFEPATHPQRTNEAGQVNFGQLTVSGAKGEYTITPRATLATNQ
QVYGESLRIHIQPDSTKAAEINVTFHGSMQCTAGTQLPDCEVSVVAEDLNVMTNIMAPHI
AMGIKESSAEDIPENVHLISPPNVGPAGNGLFYFQKVRVPEKAGTYSVMINYISADTRLT
SPMYAVNVVPALPNRLVPLNQPPTATVSNQTRAQNRQLVKAMELQLLDIYNNVCTQDEAT
GTVAVTVISTRNVATPQLVGGVSSTFRLVKGICMINELLVKENCPGQDGEQYLLRFVVSL
PAFPNLSISPFDFQFLFFDDVKKQREMAQLTRQRDQLSEFLRTCSTMFQSSYQIINEYES
KVREYAAQEQRMQQDLRRSKVPPECIATVDAVEDYIGKCTIEKEKLAQAPRRQCLLPAVG
GHDPEILGKIAHLAQVVDDDIARVLSWHMASDMDCVVTMTTAKAKEVYRQSHGNQQVLPL
DGIYRRNLPDWNRPLPHLKGGSRSRPTAGNPVYARDLLVFTRDPDNCKIVIGMLLGETII
IDTLEEATSYRQEVVKFTHCPTILTRMGDRIRSNGKFGGLQNRAPTLDRMRGAVFSAPLP
QAYTTICKQIEKLQAYQQVLVKHNTAKRELKTQKERMNTIEMSTKREDMRKAEEKLQEID
TQLGLRSSNTHPQLHPSPISQPSAQLTRRTQIVGENTEPSAKRMRNSASTRSSLEVVSIE
ESGRRRLRQTTSSGDTPKKRGRYA
NT seq
6015 nt
NT seq
+upstream
nt +downstream
nt
atggaggagcctgttgtctacgtttacgaccgccgcactggcgacaaaccggaggaaata
gtttctctacaaggcgtcttcgattttcaaacgttccggaacaaactggtcgaaactctg
cacttcgatacaagagaggaatttgttatcacgaacagcagccgacaggaaatcagtgac
gacgcatcttacgagaatcgcgtcgtccagggcggcactctgtacgtcctccattcgacc
gaccaggagctactagcacccacagatgaaagaatcgattacgttccgcactacgacact
ttagtcaagagcggtatctatgagtactatgccagtgaaggacacaatccattgccttat
gcgttcgccgagttaatcgacaatgcactgacggcgactgcaaagaacgagggagagagg
aacattgatctttacttgtacttggaggactcacctgtcatctgtgtctttgacaatggg
cgtggcatgacatctcgtcagctcaaccattgggccatctatcgtttgtctaagtttcta
cggaataaaggaagcgatttgaatgaatcgtttgtgcaacagaagacgcctcgatcattg
aacagtgacatctcttactttggagtgggagggaagcaagctatcttttttattggaacg
tcatgcagaatggtctcaaagactcgtcattgtggtgatgttcacgaattgagtatgtcg
aaggaagaatttgaggtcaaggagaaggagagaaaatcagtgttttcaggacgcattaga
aacagaaggcctggagatgccagtcacctacagacaggcggtaacgaaattctgaaaaag
ctaatcgaagacgaagaggtgaatagagaacaatttacagcagtcttcatcagcgaaatt
gcggagaagaacgttcagtatcttaccaagaattttgcgacttggagcagacagctcgct
catatttaccactactatcttcacggattgcacggaaacgtcgcagacaaacaggaaaga
ccgccgacttctttcaagcagatcaacatcactattcatatgaaagctggtaaagacaag
acgatgttgcctcttcgtctagtcgaagacgacatgcaaacgcgatacattcgttctgcg
aaatcgacgtttgaattcaaagtggacgtgcagggcgttggagaagtggaaggtgtgcta
agataccatccttttgagtatgatcacgagacgtatcccgtatctttggacgctgaagag
gaattttcggacattgaagatgttgaggatgccgtccagccgtcgagaaaagcgcgagga
aatagtgcgatgttcgaatgcttctggaacggtagactcattccctacacaacaatcgac
gggcttgagttctgtgagccatctaagcggacgacaacgacggctcctttggaatgctat
tctaggatatctggttgtctctttactaacgacgcctttcaagtcagcaccaacaaactg
acgttcatcgatctgccagtgaagttaaaggaaaagagcaatactattatctactcggtt
gtgacgagtgatggtcgttcgattcgtgacattaggaagcactttcagcattggctacgc
gattgtcatgagaaattcgacaaggaggtgcattttatcgagcagacaggatcagatcgg
aggcgggaaaacgtggaaagcaagcgtcgtcagcatccatggtgcgtgtatcaaaggatc
gagctcgatggcaagacctatcagtcaggagatgtggtgaaaacgtgtcggactaatccc
ttagtttgtgggcgtgtggtaaacttttggctctacggacgccatgatggcgacacgttt
gccaacacgggcgagatggaaatacatcaagagccaacgatgctctacaccactgcaaag
ttttatcctctaaccaaactcgacagacaaacttcggaggaagaaatattagagatcatc
aaggaagagcaattgaagttacctaaagtgctcgaagtcagctttcctgagaacaatgaa
gtgaaggagaagggaaaggttgtttgtgggaaaccggttggtccagtgcaggttcagatt
ctgaatgggaagggagagacaattggtcgactggccggcactgtgggaaggaaacttggt
gtcgagcagacggtgacatgtggagagaaagagatctgtagacatgttggagagtacagt
tcaaagtggttctactggtttaggatgataagcgagctaaagcatctcggttctcatacg
atgaaattacaggcagttgtattggacggtgacaagcaacaacagagtcttcaactgccg
tcgtcgaccatcaatttcgtagtaactgaggcacccgcaacgagttttaaaattgtgcca
cttgaagagccatacaaagtcggagaaccatttcaggtccaactcgaactctttgacaag
ttcaacaatcgagctcgcttacctcctggatcagaaccccaactatctgctgccggtgtt
agtttttctgtcaaagatggtgtaactaaaggcaacgtagtgacaatccgtggagtagta
gcaactgccaaagtcaacaacacctcaggacagacattcaaactgaaagtgtctgtcgct
actatacaatctgaatatctcgagacgaaattaagattgataccaggaaatccacacgtg
ctcgaatgtgtttctgctggtccctttttggtcgagaattacaaatctcttcagatgacc
gttcacgtcaaggactgcagtggaaactttataacagattcacaagtcaagcttgtatgc
aagctgtctggagctgattcgttgccaacgtactatgcagattgctctaatggagtagct
acattttctggtgaaagcattatgatcaagagacagttcactggtagaagatcgacttgt
ggactgcaagcaaagatatcagtaatgggaaatgacaaaatccctgctattgaaacaaaa
gtcatagtacagccacgctcatctccatctaagataattatttatcacaaagctgtcggg
tcagcagcaaagaaacagttgcttcctgaacaagacatttcagctcccgtcggatcgacc
gtcacaggactctcatttgctgttttcgatgaggcaaatagggaagtaaatatcaacgac
tttgcatctaatgttaaggtgaattggacaaacaagttgaacacggagtctgtcatgtct
ggtctattacccggcataccggttccgtcggtcgtctcggagatgaaatattgcgaagtc
agtctgagtggaatgggcatcgagagcagtttccaaatcaagccaactgtcggtgaattc
agtgctctcaagtgcatagcaagtcatcggcaagtgcaagtgaagcagacagacgacgta
gtcattaccgtccagtgcacagacaaatttggcaatatcctttcaaagctgccacccggg
tttagcgagcagctgaatgtgtctggtgcagacttggatgttaatgaactgaaagtaaca
acgtcttcgaacaatcaggttacgatcaatggtatcgccttcaacaaagttgaattggtt
attcgtgagttgactgtgagctttcaaggaataaaggcttacgtcacgtttgatgttgtt
gctggaagtcccgctcaagtcaaatttcttcactacaatccaaaggagccgatttacgtg
tacaacgagtctcggttgcctgctgcgctcattatccaactctacgataaatttggaaac
gtgtcaccagaagaaaacgttaagattgcgcttggcaagacggctggtctcaagttcgag
ccggccactcacccgcagagaaccaatgaagcaggacaggtgaattttggtcagttgaca
gttagcggagccaagggcgaatacacgattacaccgagagcaacattggcaactaatcag
caggtgtacggtgaaagtcttagaattcatattcaaccagactcgacgaaggctgctgaa
atcaacgttacctttcatggctccatgcagtgtacagcgggaactcaattgccagactgt
gaagtgtctgttgtggccgaggatctcaatgttatgacaaacattatggcacctcacatt
gcaatgggaatcaaagagagttcagctgaagacatacctgagaacgttcatctcatatct
cctcctaatgtaggaccagccggcaacggtctcttctatttccagaaggtacgtgtacct
gaaaaagctggcacgtactcggtcatgatcaactacatatcggcagacacaaggcttact
agtccgatgtatgctgtcaatgttgtgcctgcacttcccaatcgtctagttcctctaaat
caaccaccaactgcaaccgtctcgaatcagacacgagcacagaaccgacaattggtgaag
gccatggaactacaactacttgacatctataataacgtatgcacacaagacgaggcgaca
ggcacagtcgcagtgacagtcatctcgactcgaaacgttgcgactcctcagctagtcggc
ggtgtctcttcgacgtttcgtcttgttaagggtatttgtatgatcaatgaacttttggtc
aaagagaactgtcccggtcaagacggagaacaatatctgctaagatttgtagtcagtctg
ccagcattcccgaatctttccatttcgccgttcgactttcaatttttgttttttgacgat
gtcaagaagcaacgagaaatggctcagttgactaggcaaagagatcaactgtctgagttt
ttgaggacgtgttcgacgatgtttcagtcctcataccaaatcatcaatgagtatgaaagt
aaagtaagggagtacgctgcacaagaacagagaatgcagcaagatctacgacggagcaag
gtgcctcccgaatgcatagcaacggtggatgccgttgaagactacattggtaagtgtacg
atcgagaaagagaaactggctcaggctcctcggcgtcaatgccttcttccagctgtcgga
ggacacgacccagagattttaggaaagattgctcatttagcacaagtagtggatgacgac
atagcgagagtgctgtcgtggcatatggccagtgatatggactgcgtagtaaccatgacg
acagcaaaggcaaaggaagtctaccgtcaatctcatggcaaccagcaagtgcttcccctc
gatggtatatacagacggaatcttcccgactggaacaggccgctgcctcatctgaaggga
ggatcgagatcgagaccaactgctgggaatcctgtttatgctagagatctgcttgtgttt
actcgtgatcctgataattgcaaaatcgtgattggaatgttgctgggagaaacaatcatt
attgatactttagaagaagctacgtcttacaggcaagaagttgtaaaatttactcattgt
cctactattcttactcgaatgggagacagaatacggagcaatgggaagtttggtggtctt
caaaatcgtgctcccactttggacagaatgcgtggtgctgtgttttctgctcctctgccc
caagcttatacaactatttgtaaacagatagaaaaacttcaagcataccagcaagtgctt
gtgaaacacaacaccgccaagcgagaactcaagactcagaaggagcgcatgaatacaatc
gaaatgtccacaaaacgcgaagacatgcgtaaagccgaagaaaaactgcaggaaattgac
acccaattgggtctccggtcttcaaacacccacccacagctccatccctctccaatcagc
caaccatcagcccaactgactcggagaactcaaattgtcggagagaatactgagccatca
gccaaacgaatgaggaactcagcatcgactcgatcttcattggaggttgtctctattgag
gagtcgggcagacgtcgattgagacagacgacgtcatcgggtgacaccccaaagaagaga
ggtcgatatgcataa
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integrated database retrieval system
